SILENT_MODE BLOCK_FILE jp_ML1Yr0O.concise.blc MAX_NSEQ 440 MAX_INPUT_LEN 442 OUTPUT_FILE jp_ML1Yr0O.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 257 429 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 430 257 439 H SPACE SUB_CHARS 1 430 257 439 E SPACE SUB_CHARS 1 430 257 439 - SPACE STRAND 12 433 13 COLOUR_TEXT_REGION 12 433 13 433 51 STRAND 41 433 44 COLOUR_TEXT_REGION 41 433 44 433 51 STRAND 74 433 77 COLOUR_TEXT_REGION 74 433 77 433 51 STRAND 83 433 86 COLOUR_TEXT_REGION 83 433 86 433 51 STRAND 90 433 94 COLOUR_TEXT_REGION 90 433 94 433 51 STRAND 136 433 141 COLOUR_TEXT_REGION 136 433 141 433 51 STRAND 155 433 158 COLOUR_TEXT_REGION 155 433 158 433 51 STRAND 187 433 195 COLOUR_TEXT_REGION 187 433 195 433 51 STRAND 215 433 220 COLOUR_TEXT_REGION 215 433 220 433 51 STRAND 225 433 230 COLOUR_TEXT_REGION 225 433 230 433 51 HELIX 19 433 20 COLOUR_TEXT_REGION 19 433 20 433 50 HELIX 23 433 35 COLOUR_TEXT_REGION 23 433 35 433 50 HELIX 48 433 66 COLOUR_TEXT_REGION 48 433 66 433 50 HELIX 117 433 132 COLOUR_TEXT_REGION 117 433 132 433 50 HELIX 162 433 172 COLOUR_TEXT_REGION 162 433 172 433 50 HELIX 176 433 181 COLOUR_TEXT_REGION 176 433 181 433 50 HELIX 235 433 254 COLOUR_TEXT_REGION 235 433 254 433 50 STRAND 12 438 13 COLOUR_TEXT_REGION 12 438 13 438 51 STRAND 41 438 44 COLOUR_TEXT_REGION 41 438 44 438 51 STRAND 74 438 77 COLOUR_TEXT_REGION 74 438 77 438 51 STRAND 83 438 86 COLOUR_TEXT_REGION 83 438 86 438 51 STRAND 90 438 94 COLOUR_TEXT_REGION 90 438 94 438 51 STRAND 136 438 142 COLOUR_TEXT_REGION 136 438 142 438 51 STRAND 156 438 158 COLOUR_TEXT_REGION 156 438 158 438 51 STRAND 172 438 172 COLOUR_TEXT_REGION 172 438 172 438 51 STRAND 187 438 195 COLOUR_TEXT_REGION 187 438 195 438 51 STRAND 215 438 220 COLOUR_TEXT_REGION 215 438 220 438 51 STRAND 225 438 230 COLOUR_TEXT_REGION 225 438 230 438 51 HELIX 18 438 20 COLOUR_TEXT_REGION 18 438 20 438 50 HELIX 23 438 35 COLOUR_TEXT_REGION 23 438 35 438 50 HELIX 48 438 66 COLOUR_TEXT_REGION 48 438 66 438 50 HELIX 117 438 132 COLOUR_TEXT_REGION 117 438 132 438 50 HELIX 162 438 171 COLOUR_TEXT_REGION 162 438 171 438 50 HELIX 176 438 181 COLOUR_TEXT_REGION 176 438 181 438 50 HELIX 235 438 255 COLOUR_TEXT_REGION 235 438 255 438 50 STRAND 40 439 44 COLOUR_TEXT_REGION 40 439 44 439 51 STRAND 64 439 66 COLOUR_TEXT_REGION 64 439 66 439 51 STRAND 74 439 77 COLOUR_TEXT_REGION 74 439 77 439 51 STRAND 85 439 85 COLOUR_TEXT_REGION 85 439 85 439 51 STRAND 91 439 93 COLOUR_TEXT_REGION 91 439 93 439 51 STRAND 137 439 139 COLOUR_TEXT_REGION 137 439 139 439 51 STRAND 154 439 158 COLOUR_TEXT_REGION 154 439 158 439 51 STRAND 188 439 194 COLOUR_TEXT_REGION 188 439 194 439 51 STRAND 214 439 220 COLOUR_TEXT_REGION 214 439 220 439 51 STRAND 225 439 230 COLOUR_TEXT_REGION 225 439 230 439 51 HELIX 23 439 35 COLOUR_TEXT_REGION 23 439 35 439 50 HELIX 48 439 61 COLOUR_TEXT_REGION 48 439 61 439 50 HELIX 117 439 131 COLOUR_TEXT_REGION 117 439 131 439 50 HELIX 162 439 173 COLOUR_TEXT_REGION 162 439 173 439 50 HELIX 176 439 181 COLOUR_TEXT_REGION 176 439 181 439 50 HELIX 236 439 254 COLOUR_TEXT_REGION 236 439 254 439 50