SILENT_MODE BLOCK_FILE jp_8VaOiZg.concise.blc MAX_NSEQ 1142 MAX_INPUT_LEN 1144 OUTPUT_FILE jp_8VaOiZg.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 214 1131 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1132 214 1141 H SPACE SUB_CHARS 1 1132 214 1141 E SPACE SUB_CHARS 1 1132 214 1141 - SPACE STRAND 3 1135 6 COLOUR_TEXT_REGION 3 1135 6 1135 51 STRAND 12 1135 17 COLOUR_TEXT_REGION 12 1135 17 1135 51 STRAND 57 1135 65 COLOUR_TEXT_REGION 57 1135 65 1135 51 STRAND 83 1135 89 COLOUR_TEXT_REGION 83 1135 89 1135 51 STRAND 154 1135 160 COLOUR_TEXT_REGION 154 1135 160 1135 51 HELIX 21 1135 30 COLOUR_TEXT_REGION 21 1135 30 1135 50 HELIX 37 1135 48 COLOUR_TEXT_REGION 37 1135 48 1135 50 HELIX 68 1135 76 COLOUR_TEXT_REGION 68 1135 76 1135 50 HELIX 112 1135 136 COLOUR_TEXT_REGION 112 1135 136 1135 50 HELIX 141 1135 147 COLOUR_TEXT_REGION 141 1135 147 1135 50 HELIX 161 1135 172 COLOUR_TEXT_REGION 161 1135 172 1135 50 HELIX 178 1135 203 COLOUR_TEXT_REGION 178 1135 203 1135 50 STRAND 3 1140 6 COLOUR_TEXT_REGION 3 1140 6 1140 51 STRAND 12 1140 16 COLOUR_TEXT_REGION 12 1140 16 1140 51 STRAND 57 1140 65 COLOUR_TEXT_REGION 57 1140 65 1140 51 STRAND 83 1140 90 COLOUR_TEXT_REGION 83 1140 90 1140 51 STRAND 154 1140 160 COLOUR_TEXT_REGION 154 1140 160 1140 51 HELIX 21 1140 30 COLOUR_TEXT_REGION 21 1140 30 1140 50 HELIX 37 1140 48 COLOUR_TEXT_REGION 37 1140 48 1140 50 HELIX 54 1140 56 COLOUR_TEXT_REGION 54 1140 56 1140 50 HELIX 68 1140 77 COLOUR_TEXT_REGION 68 1140 77 1140 50 HELIX 112 1140 137 COLOUR_TEXT_REGION 112 1140 137 1140 50 HELIX 141 1140 147 COLOUR_TEXT_REGION 141 1140 147 1140 50 HELIX 161 1140 172 COLOUR_TEXT_REGION 161 1140 172 1140 50 HELIX 178 1140 203 COLOUR_TEXT_REGION 178 1140 203 1140 50 STRAND 3 1141 6 COLOUR_TEXT_REGION 3 1141 6 1141 51 STRAND 12 1141 17 COLOUR_TEXT_REGION 12 1141 17 1141 51 STRAND 57 1141 66 COLOUR_TEXT_REGION 57 1141 66 1141 51 STRAND 81 1141 82 COLOUR_TEXT_REGION 81 1141 82 1141 51 STRAND 96 1141 99 COLOUR_TEXT_REGION 96 1141 99 1141 51 STRAND 154 1141 160 COLOUR_TEXT_REGION 154 1141 160 1141 51 HELIX 22 1141 30 COLOUR_TEXT_REGION 22 1141 30 1141 50 HELIX 37 1141 48 COLOUR_TEXT_REGION 37 1141 48 1141 50 HELIX 68 1141 75 COLOUR_TEXT_REGION 68 1141 75 1141 50 HELIX 83 1141 86 COLOUR_TEXT_REGION 83 1141 86 1141 50 HELIX 113 1141 136 COLOUR_TEXT_REGION 113 1141 136 1141 50 HELIX 141 1141 147 COLOUR_TEXT_REGION 141 1141 147 1141 50 HELIX 162 1141 172 COLOUR_TEXT_REGION 162 1141 172 1141 50 HELIX 179 1141 203 COLOUR_TEXT_REGION 179 1141 203 1141 50