SILENT_MODE
BLOCK_FILE jp_57nQFk8.concise.blc
MAX_NSEQ 50
MAX_INPUT_LEN 50
OUTPUT_FILE jp_57nQFk8.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 97 36   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 37 97 46 H SPACE
SUB_CHARS 1 37 97 46 E SPACE
SUB_CHARS 1 37 97 46 - SPACE
STRAND 4 40 4
COLOUR_TEXT_REGION 4 40 4 40 51
STRAND 13 40 14
COLOUR_TEXT_REGION 13 40 14 40 51
STRAND 50 40 52
COLOUR_TEXT_REGION 50 40 52 40 51
STRAND 57 40 63
COLOUR_TEXT_REGION 57 40 63 40 51
HELIX 21 40 21
COLOUR_TEXT_REGION 21 40 21 40 50
HELIX 24 40 29
COLOUR_TEXT_REGION 24 40 29 40 50
HELIX 53 40 56
COLOUR_TEXT_REGION 53 40 56 40 50
HELIX 75 40 95
COLOUR_TEXT_REGION 75 40 95 40 50
STRAND 3 45 4
COLOUR_TEXT_REGION 3 45 4 45 51
STRAND 13 45 15
COLOUR_TEXT_REGION 13 45 15 45 51
HELIX 20 45 21
COLOUR_TEXT_REGION 20 45 21 45 50
HELIX 24 45 29
COLOUR_TEXT_REGION 24 45 29 45 50
HELIX 49 45 61
COLOUR_TEXT_REGION 49 45 61 45 50
HELIX 74 45 95
COLOUR_TEXT_REGION 74 45 95 45 50
STRAND 50 46 64
COLOUR_TEXT_REGION 50 46 64 46 51
HELIX 4 46 8
COLOUR_TEXT_REGION 4 46 8 46 50
HELIX 24 46 28
COLOUR_TEXT_REGION 24 46 28 46 50
HELIX 75 46 95
COLOUR_TEXT_REGION 75 46 95 46 50