SILENT_MODE BLOCK_FILE jp_bjpp1Fc.concise.blc MAX_NSEQ 897 MAX_INPUT_LEN 899 OUTPUT_FILE jp_bjpp1Fc.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 314 886 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 887 314 896 H SPACE SUB_CHARS 1 887 314 896 E SPACE SUB_CHARS 1 887 314 896 - SPACE STRAND 4 890 10 COLOUR_TEXT_REGION 4 890 10 890 51 STRAND 90 890 94 COLOUR_TEXT_REGION 90 890 94 890 51 STRAND 115 890 119 COLOUR_TEXT_REGION 115 890 119 890 51 STRAND 170 890 174 COLOUR_TEXT_REGION 170 890 174 890 51 STRAND 193 890 195 COLOUR_TEXT_REGION 193 890 195 890 51 STRAND 223 890 228 COLOUR_TEXT_REGION 223 890 228 890 51 STRAND 267 890 274 COLOUR_TEXT_REGION 267 890 274 890 51 HELIX 20 890 35 COLOUR_TEXT_REGION 20 890 35 890 50 HELIX 68 890 85 COLOUR_TEXT_REGION 68 890 85 890 50 HELIX 101 890 109 COLOUR_TEXT_REGION 101 890 109 890 50 HELIX 138 890 147 COLOUR_TEXT_REGION 138 890 147 890 50 HELIX 180 890 188 COLOUR_TEXT_REGION 180 890 188 890 50 HELIX 196 890 202 COLOUR_TEXT_REGION 196 890 202 890 50 HELIX 204 890 216 COLOUR_TEXT_REGION 204 890 216 890 50 HELIX 250 890 262 COLOUR_TEXT_REGION 250 890 262 890 50 HELIX 283 890 305 COLOUR_TEXT_REGION 283 890 305 890 50 STRAND 4 895 9 COLOUR_TEXT_REGION 4 895 9 895 51 STRAND 90 895 94 COLOUR_TEXT_REGION 90 895 94 895 51 STRAND 115 895 119 COLOUR_TEXT_REGION 115 895 119 895 51 STRAND 170 895 175 COLOUR_TEXT_REGION 170 895 175 895 51 STRAND 192 895 195 COLOUR_TEXT_REGION 192 895 195 895 51 STRAND 223 895 228 COLOUR_TEXT_REGION 223 895 228 895 51 STRAND 267 895 274 COLOUR_TEXT_REGION 267 895 274 895 51 HELIX 19 895 35 COLOUR_TEXT_REGION 19 895 35 895 50 HELIX 69 895 85 COLOUR_TEXT_REGION 69 895 85 895 50 HELIX 100 895 109 COLOUR_TEXT_REGION 100 895 109 895 50 HELIX 138 895 147 COLOUR_TEXT_REGION 138 895 147 895 50 HELIX 180 895 188 COLOUR_TEXT_REGION 180 895 188 895 50 HELIX 196 895 216 COLOUR_TEXT_REGION 196 895 216 895 50 HELIX 250 895 262 COLOUR_TEXT_REGION 250 895 262 895 50 HELIX 283 895 304 COLOUR_TEXT_REGION 283 895 304 895 50 STRAND 4 896 10 COLOUR_TEXT_REGION 4 896 10 896 51 STRAND 90 896 94 COLOUR_TEXT_REGION 90 896 94 896 51 STRAND 115 896 119 COLOUR_TEXT_REGION 115 896 119 896 51 STRAND 170 896 173 COLOUR_TEXT_REGION 170 896 173 896 51 STRAND 193 896 194 COLOUR_TEXT_REGION 193 896 194 896 51 STRAND 222 896 227 COLOUR_TEXT_REGION 222 896 227 896 51 STRAND 266 896 274 COLOUR_TEXT_REGION 266 896 274 896 51 HELIX 21 896 34 COLOUR_TEXT_REGION 21 896 34 896 50 HELIX 66 896 84 COLOUR_TEXT_REGION 66 896 84 896 50 HELIX 104 896 108 COLOUR_TEXT_REGION 104 896 108 896 50 HELIX 139 896 147 COLOUR_TEXT_REGION 139 896 147 896 50 HELIX 180 896 188 COLOUR_TEXT_REGION 180 896 188 896 50 HELIX 195 896 201 COLOUR_TEXT_REGION 195 896 201 896 50 HELIX 205 896 216 COLOUR_TEXT_REGION 205 896 216 896 50 HELIX 235 896 237 COLOUR_TEXT_REGION 235 896 237 896 50 HELIX 250 896 262 COLOUR_TEXT_REGION 250 896 262 896 50 HELIX 282 896 305 COLOUR_TEXT_REGION 282 896 305 896 50