SILENT_MODE BLOCK_FILE jp_qbL0klr.concise.blc MAX_NSEQ 820 MAX_INPUT_LEN 822 OUTPUT_FILE jp_qbL0klr.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 319 809 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 810 319 819 H SPACE SUB_CHARS 1 810 319 819 E SPACE SUB_CHARS 1 810 319 819 - SPACE STRAND 3 813 8 COLOUR_TEXT_REGION 3 813 8 813 51 STRAND 34 813 38 COLOUR_TEXT_REGION 34 813 38 813 51 STRAND 49 813 51 COLOUR_TEXT_REGION 49 813 51 813 51 STRAND 96 813 100 COLOUR_TEXT_REGION 96 813 100 813 51 STRAND 119 813 121 COLOUR_TEXT_REGION 119 813 121 813 51 STRAND 163 813 169 COLOUR_TEXT_REGION 163 813 169 813 51 STRAND 188 813 191 COLOUR_TEXT_REGION 188 813 191 813 51 STRAND 216 813 221 COLOUR_TEXT_REGION 216 813 221 813 51 STRAND 242 813 245 COLOUR_TEXT_REGION 242 813 245 813 51 STRAND 251 813 251 COLOUR_TEXT_REGION 251 813 251 813 51 STRAND 282 813 287 COLOUR_TEXT_REGION 282 813 287 813 51 STRAND 291 813 294 COLOUR_TEXT_REGION 291 813 294 813 51 HELIX 16 813 29 COLOUR_TEXT_REGION 16 813 29 813 50 HELIX 57 813 62 COLOUR_TEXT_REGION 57 813 62 813 50 HELIX 82 813 91 COLOUR_TEXT_REGION 82 813 91 813 50 HELIX 104 813 115 COLOUR_TEXT_REGION 104 813 115 813 50 HELIX 139 813 158 COLOUR_TEXT_REGION 139 813 158 813 50 HELIX 174 813 182 COLOUR_TEXT_REGION 174 813 182 813 50 HELIX 198 813 211 COLOUR_TEXT_REGION 198 813 211 813 50 HELIX 229 813 236 COLOUR_TEXT_REGION 229 813 236 813 50 HELIX 258 813 277 COLOUR_TEXT_REGION 258 813 277 813 50 HELIX 296 813 301 COLOUR_TEXT_REGION 296 813 301 813 50 HELIX 308 813 316 COLOUR_TEXT_REGION 308 813 316 813 50 STRAND 3 818 8 COLOUR_TEXT_REGION 3 818 8 818 51 STRAND 33 818 38 COLOUR_TEXT_REGION 33 818 38 818 51 STRAND 49 818 51 COLOUR_TEXT_REGION 49 818 51 818 51 STRAND 96 818 100 COLOUR_TEXT_REGION 96 818 100 818 51 STRAND 119 818 122 COLOUR_TEXT_REGION 119 818 122 818 51 STRAND 163 818 169 COLOUR_TEXT_REGION 163 818 169 818 51 STRAND 188 818 192 COLOUR_TEXT_REGION 188 818 192 818 51 STRAND 216 818 221 COLOUR_TEXT_REGION 216 818 221 818 51 STRAND 241 818 246 COLOUR_TEXT_REGION 241 818 246 818 51 STRAND 282 818 287 COLOUR_TEXT_REGION 282 818 287 818 51 STRAND 291 818 294 COLOUR_TEXT_REGION 291 818 294 818 51 HELIX 14 818 29 COLOUR_TEXT_REGION 14 818 29 818 50 HELIX 57 818 62 COLOUR_TEXT_REGION 57 818 62 818 50 HELIX 82 818 91 COLOUR_TEXT_REGION 82 818 91 818 50 HELIX 105 818 114 COLOUR_TEXT_REGION 105 818 114 818 50 HELIX 140 818 157 COLOUR_TEXT_REGION 140 818 157 818 50 HELIX 174 818 182 COLOUR_TEXT_REGION 174 818 182 818 50 HELIX 198 818 211 COLOUR_TEXT_REGION 198 818 211 818 50 HELIX 229 818 236 COLOUR_TEXT_REGION 229 818 236 818 50 HELIX 258 818 277 COLOUR_TEXT_REGION 258 818 277 818 50 HELIX 296 818 301 COLOUR_TEXT_REGION 296 818 301 818 50 HELIX 308 818 316 COLOUR_TEXT_REGION 308 818 316 818 50 STRAND 3 819 8 COLOUR_TEXT_REGION 3 819 8 819 51 STRAND 34 819 39 COLOUR_TEXT_REGION 34 819 39 819 51 STRAND 50 819 51 COLOUR_TEXT_REGION 50 819 51 819 51 STRAND 95 819 99 COLOUR_TEXT_REGION 95 819 99 819 51 STRAND 163 819 169 COLOUR_TEXT_REGION 163 819 169 819 51 STRAND 188 819 190 COLOUR_TEXT_REGION 188 819 190 819 51 STRAND 217 819 220 COLOUR_TEXT_REGION 217 819 220 819 51 STRAND 250 819 251 COLOUR_TEXT_REGION 250 819 251 819 51 STRAND 282 819 287 COLOUR_TEXT_REGION 282 819 287 819 51 STRAND 291 819 295 COLOUR_TEXT_REGION 291 819 295 819 51 HELIX 16 819 29 COLOUR_TEXT_REGION 16 819 29 819 50 HELIX 56 819 62 COLOUR_TEXT_REGION 56 819 62 819 50 HELIX 81 819 91 COLOUR_TEXT_REGION 81 819 91 819 50 HELIX 103 819 119 COLOUR_TEXT_REGION 103 819 119 819 50 HELIX 124 819 127 COLOUR_TEXT_REGION 124 819 127 819 50 HELIX 139 819 159 COLOUR_TEXT_REGION 139 819 159 819 50 HELIX 175 819 182 COLOUR_TEXT_REGION 175 819 182 819 50 HELIX 199 819 211 COLOUR_TEXT_REGION 199 819 211 819 50 HELIX 229 819 236 COLOUR_TEXT_REGION 229 819 236 819 50 HELIX 257 819 277 COLOUR_TEXT_REGION 257 819 277 819 50 HELIX 297 819 301 COLOUR_TEXT_REGION 297 819 301 819 50 HELIX 308 819 317 COLOUR_TEXT_REGION 308 819 317 819 50