SILENT_MODE BLOCK_FILE jp_nigszC3.concise.blc MAX_NSEQ 665 MAX_INPUT_LEN 667 OUTPUT_FILE jp_nigszC3.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 161 654 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 655 161 664 H SPACE SUB_CHARS 1 655 161 664 E SPACE SUB_CHARS 1 655 161 664 - SPACE STRAND 4 658 9 COLOUR_TEXT_REGION 4 658 9 658 51 STRAND 14 658 18 COLOUR_TEXT_REGION 14 658 18 658 51 STRAND 30 658 34 COLOUR_TEXT_REGION 30 658 34 658 51 STRAND 38 658 42 COLOUR_TEXT_REGION 38 658 42 658 51 STRAND 54 658 57 COLOUR_TEXT_REGION 54 658 57 658 51 STRAND 74 658 77 COLOUR_TEXT_REGION 74 658 77 658 51 STRAND 84 658 89 COLOUR_TEXT_REGION 84 658 89 658 51 STRAND 96 658 100 COLOUR_TEXT_REGION 96 658 100 658 51 STRAND 113 658 117 COLOUR_TEXT_REGION 113 658 117 658 51 STRAND 121 658 126 COLOUR_TEXT_REGION 121 658 126 658 51 STRAND 133 658 138 COLOUR_TEXT_REGION 133 658 138 658 51 STRAND 155 658 159 COLOUR_TEXT_REGION 155 658 159 658 51 STRAND 4 663 9 COLOUR_TEXT_REGION 4 663 9 663 51 STRAND 14 663 19 COLOUR_TEXT_REGION 14 663 19 663 51 STRAND 28 663 33 COLOUR_TEXT_REGION 28 663 33 663 51 STRAND 38 663 42 COLOUR_TEXT_REGION 38 663 42 663 51 STRAND 54 663 56 COLOUR_TEXT_REGION 54 663 56 663 51 STRAND 74 663 76 COLOUR_TEXT_REGION 74 663 76 663 51 STRAND 84 663 89 COLOUR_TEXT_REGION 84 663 89 663 51 STRAND 97 663 100 COLOUR_TEXT_REGION 97 663 100 663 51 STRAND 114 663 117 COLOUR_TEXT_REGION 114 663 117 663 51 STRAND 121 663 126 COLOUR_TEXT_REGION 121 663 126 663 51 STRAND 134 663 138 COLOUR_TEXT_REGION 134 663 138 663 51 STRAND 155 663 160 COLOUR_TEXT_REGION 155 663 160 663 51 STRAND 4 664 9 COLOUR_TEXT_REGION 4 664 9 664 51 STRAND 14 664 17 COLOUR_TEXT_REGION 14 664 17 664 51 STRAND 30 664 34 COLOUR_TEXT_REGION 30 664 34 664 51 STRAND 37 664 42 COLOUR_TEXT_REGION 37 664 42 664 51 STRAND 54 664 58 COLOUR_TEXT_REGION 54 664 58 664 51 STRAND 74 664 77 COLOUR_TEXT_REGION 74 664 77 664 51 STRAND 84 664 89 COLOUR_TEXT_REGION 84 664 89 664 51 STRAND 96 664 100 COLOUR_TEXT_REGION 96 664 100 664 51 STRAND 112 664 117 COLOUR_TEXT_REGION 112 664 117 664 51 STRAND 122 664 126 COLOUR_TEXT_REGION 122 664 126 664 51 STRAND 132 664 137 COLOUR_TEXT_REGION 132 664 137 664 51 STRAND 155 664 158 COLOUR_TEXT_REGION 155 664 158 664 51