QUERY : MEKLVQPTPLLLSLLKSAGAQKETFTMKEVLYHLGQYIMAKQLYDEKQQHIVHCSNDPLGELFGVQEFSVKEHRRIYAMISRNLVS : QUERY
UniRef90_G1P8J9 : IKQQVRPKPPLLKILQAAGAQGEIFTVTQVMHFLGQYITMKQLYDPREQHMVYCSGDLLGELLGCQSFSVKDPSPLYAMLRKNLVA : UniRef90_G1P8J9
UniRef90_I3MUQ5 : -ETLYRPKPLFMKLLKSVGAQNDIYTIKDIIFYLGQYIMTKRLYDEKEQHMVYCSNDLLGDLFGVPSFSVKEHRKIYAMIYKNLV- : UniRef90_I3MUQ5
UniRef90_UPI000441DDF7 : -EALIKPKPLLLKILQLAGAEKDTFTMKEILFYIGQYIMSKRLYDEKQQHIVHCANDLLGDLFGVQSFSIKERRQLYSMISKHLVT : UniRef90_UPI000441DDF7
UniRef90_UPI0003C2B5CE : --RQVRPRLPFLRILQAAGAQGETFTLKEVMHYLGQYIMVRELYDKQEQHIVHCGGDPLRELMGLDSFSVTNPRPVYDMLRRNLLS : UniRef90_UPI0003C2B5CE
UniRef90_H3BCL6 : --RQVRPTLPLLKLLHASGAEGEIFTLKEVMNCLGQYIMLKQLYDKQQQHIVYCGNDPLGELIGVQSFSVRDPSPLYDMLRRNLTS : UniRef90_H3BCL6
UniRef90_G9J1M2 : ----IRPKPLLLNLLHEAGASGEIFTLKEVMHYLGQYIMLKQLYDKQQQHIVYCGNDPLGKVFGVESFSVKVPSQLYEMLSRNLIA : UniRef90_G9J1M2
UniRef90_W5NH41 : -EKLVKPKTKLHALLQHAGADKDIFTMKEIMFYLGQYIMDKQLYDKKQQHIVHCTNDLLGDVLGVNSFSVKEPRNLYALISKNLIA : UniRef90_W5NH41
UniRef90_B5DFR1 : -ESPVRPQPALLKILQTAGASGEIFTLKQVMHYLGQYIMVKELYDKQQQHIVHCGSDELGKLLGITTFSVKDPRPLYDMLKKNL-- : UniRef90_B5DFR1
UniRef90_V8PBT7 : --KQVRPKLPLLKVLHAAGANGETFTLKECMIYLGEYIAQKQLYDKEQQHMVHCGKDQLGKLLGCQSFSVKEPSLVYDMLRRNVT- : UniRef90_V8PBT7
UniRef90_G3N7Y3 : -DKLVQPKLEFRTLLHQAGATKEVFTMKEVMFYLGQYIILKQLYDQKQQHIVHCSQDALGRVLGVDSFSVKEPRVLFAMITKNLVA : UniRef90_G3N7Y3
UniRef90_O42354 : -EKLVRPKVQLKSLLEDAGADKDVFTMKEVMFYLGKYIMSKELYDKQQQHIVHCGEDPLGAVLGVKSFSVKEPRALFALINRNLVT : UniRef90_O42354
UniRef90_UPI000398FA85 : ---QVRPKLPLLKLLQAAGAQGETFTLKEVMHYLGQYIMVKQLYDKNQQHMVYCGGDQLGELLGLESFSVKDPSPVYDMLKRNLTS : UniRef90_UPI000398FA85
UniRef90_V8NMZ8 : -----------MKLLQFAGAEKDTFTMKEILFYIGQYIMSKRLYDEKQQHIVHCANDLLGHLFGVQSFSIKEHRQLYLMISKNLVT : UniRef90_V8NMZ8
UniRef90_UPI0003D09E89 : -EALVRPKPLLLKLLKFAGAEKDIFTMREVMFYLGQYIMTKQLYDEREQHIVHCENDHLGDLFGVPSFSVKEHRKVYSMISRNLVA : UniRef90_UPI0003D09E89
UniRef90_UPI0003C290C3 : -----------------AGAEKDIFTMKEVMFYLGQYIMTKQLYDEREQHIVHCENDHLGDLFGVPSFSVKEHRKVYSMISRNLVA : UniRef90_UPI0003C290C3
UniRef90_UPI000359AE83 : ---QVIPKVPLLRILQAAGAQGDTFTLKEVMHFLGQYIMGRQLYDKRQQHLVHCGGDQLGELLGLQGIFLSLPSPVYEMLKRNL-- : UniRef90_UPI000359AE83
UniRef90_K7F0N6 : -EALVKQKPPLWELLKFAGAHKDTFTMKEVIFYIGQYIMSEQLYDEKEQHIINCANYLLGDLFGVLSFSAKEPKIVYAMISRNLTA : UniRef90_K7F0N6
UniRef90_H3APM8 : -----------------AGAQKDIFTMKEVIYYLGQYIMAKQLYDKNQQHIVHCSNDLLGELFGVQSFSVKEPRRLYAMISKNLL- : UniRef90_H3APM8
UniRef90_G9J1M1 : -ESQVRPKPLLLKLLQFAGAQNEIFTIKEVMYYLGQYIMAKHLYDEKQQHVVHCSDNPLGRLFGVQSFSIKEPRTLYTMLSKNLI- : UniRef90_G9J1M1
UniRef90_H2T889 : ------------RLLQDAGAIKDVFTMKEVMFYLGQYIIQKQLYDQKQQHIVHCSHDELGRVLGVDSFSVKEPRVLFAMIMKNLVA : UniRef90_H2T889
UniRef90_G3HAW6 : ------PNLPLLKILQTAGAQGEVFTMKEVMHYLGQYIMVKQLYDQREQHMVYCGGDLLGDLLGRQSFSVKDPSPLYDMLRKNLVT : UniRef90_G3HAW6
UniRef90_K7E414 : ---QFRPQTLFLRVLRDGGACEDVFTYGQILFYLGEYIKTKGLFDKEQEHVVCCSNDLLGDVFGASSFSMREHRKLSAMIYRNLIA : UniRef90_K7E414
UniRef90_UPI0002C62775 : -------TDGAVSTAQIPAAEQETL----VIFYLGQYIMMKRLYDEKQQHMVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLV- : UniRef90_UPI0002C62775
UniRef90_Q4SRB4 : ---QVQPKAPLLQILRVAGAQEEVFTLKEVMHYLGQYIMGKQLYDKQRQHIVHCQDDPLGELLEVESFSVKNPR------------ : UniRef90_Q4SRB4
UniRef90_F7C214 : ----------------SVGAQKDIYTTKEVLFYLGRYIMNKQLYDEKQQHIVYCSNDLLGNLFGVPSFSLKEHRKIYTMIYKNLV- : UniRef90_F7C214
UniRef90_UPI0003F12538 : ----------------SAGVQKDVYTVKEVIVYLGQYITAKRLYDEKQQHMVYCSNDLLGEVFGEPSFSVKDCRKIYAMIYTNLI- : UniRef90_UPI0003F12538
UniRef90_E7EPE2 : -ETLVRPKPLLLKLLKSVGAQKDTYTMKQVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLV- : UniRef90_E7EPE2
UniRef90_F7CJQ6 : --------------------------MKEVIFYLGQYIMAKQLYDEKQQHIVHCSNDLLGDLFGVPSFSVKEHRRLYAMVSRNLIA : UniRef90_F7CJQ6
UniRef90_UPI000265456B : -EIWVTPRPQFLKLLRSVGANGNTFTAKEVLSYLIKYISSRQLYDPNDPKNVFCHSDPLGQVFNVHSFTIKDAKRL---------- : UniRef90_UPI000265456B
UniRef90_M7AZ79 : ------------------------------MHYLGQYIMVRQLYDKRQQHMVYCGGDQLGELLGLESFSVKDPSPVYDMLKRNLTS : UniRef90_M7AZ79
UniRef90_Q8TE46 : -ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEFER----------- : UniRef90_Q8TE46
UniRef90_K1RKC8 : ---LFRPKKEFLKILKSGGADCDFLTKKEMCHYLKEYVFRKRLYNPHDPREVNCGEDELGRVFNVQKFTISE---VLHLIHKN--- : UniRef90_K1RKC8
UniRef90_D6QSQ9 : ---MVRPRREFLDILKQVGASWEVLTRKEVCSYLKDYIGSRQLYNPNDPSIVFCKKDPLGKVFGVDKFTFTEATKLID-------- : UniRef90_D6QSQ9
UniRef90_UPI0003F0E7FA : ----VRPREEFLNLLATVGANGQVFTPRQLLSYLIKYISSRYLYDELDPRRVYCSDDPLGKVFGVKEFTIKDVRNL---LFANVT- : UniRef90_UPI0003F0E7FA
UniRef90_H2ZPZ7 : ----FRTTPKLLAVLQLGGATCQLFTADQIVLYLGKYIENKKLFNPSNKRVIRCKNDLLGEVFRVNQFTVTDFKDLWKLLFPCLL- : UniRef90_H2ZPZ7
UniRef90_UPI00035A0174 : ---MLRPRPALLKVLQLAGGIGETYTLKEIIGLVQEYIQERKLYDENNPHMVYCGADLLGEALRVQQFSVMEALGLFHRIRRQLVT : UniRef90_UPI00035A0174
UniRef90_V4BWJ5 : ---LVRPKEAFLNVLRLAGAKVEVFTRQEIGQYLKDYIGGRKLYDPTDPRIVYCDNDPLEKAFNVTKFTLDN---VMDLINKNV-- : UniRef90_V4BWJ5
UniRef90_S5M279 : ---MVRPRREFLDLLKQVGASWEVLTRKEVCSYLKEYIGSRQLYNPNDLSIVFCQKDPLGKVFGVDKFTFTEAAKLIDMVKKHLVA : UniRef90_S5M279
UniRef90_C3Y7L6 : ----VCPKPALLNCLQKVGATGTCFTRKQVLNYLIQYMGERMLYDQNNPRVINCKDDELGKALGVPQFTIYNVKEVLA-------- : UniRef90_C3Y7L6
UniRef90_L5JT46 : --------------------------------------MNKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLV- : UniRef90_L5JT46
UniRef90_D2H8S6 : ------------------------FIAPQVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRKNLVS : UniRef90_D2H8S6
UniRef90_F7GVG9 : ----IKTKWPLLKVLQGAGA-------RVVREYPGHCLVGKQLMICRSGLWQYCGMEVFGRTTGCQQFSMKDPSPVFDKLRMNLVT : UniRef90_F7GVG9
UniRef90_T1JBG8 : VQKYYTVKPELLKLFESVGAQGMYFSALELKHFLGEYIKAKRLLDPSNCLRIDAANDPLGQVFGQDKFAMWALQRLYSFL------ : UniRef90_T1JBG8
UniRef90_UPI0001CE2B09 : --TLARPQPLLLKLCKSAGAHKDTWVLVEVIFYLGQCIMTEGFYNEKQQHMIYCAHD----------------------------- : UniRef90_UPI0001CE2B09
UniRef90_B3RT05 : ----VKPNAELMQFLPPENVNGKELTALQVMEYLIDYISSRKLCNPLRADYVDCKGDPLEKLLSCDQFPVAN---LWDRLKMHL-- : UniRef90_B3RT05
UniRef90_UPI00026592D4 : ---------AFYRILEAYGMPNEPVTFWMILFYLRKHILSKGLFDPSRPDVIKCSGDPLGTLFKRISFTNREA---VDLIKRHI-- : UniRef90_UPI00026592D4
UniRef90_F7CLJ9 : -------QPPLLKFLQAAGARRNCWSDQAVSRPLSS---GKATYDLQEQPILRCDGGLLGGLPGCQQFSMKDPSPVFDKLRKNLI- : UniRef90_F7CLJ9
UniRef90_V5HT98 : ----------------------------QIVGHLKSYVLERQLFDPKDPKMVLCANDKLGKVFGVEQFLDEEVNSL--PLYKNLLA : UniRef90_V5HT98
UniRef90_T0NRG4 : ----------------------------QVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPR------------ : UniRef90_T0NRG4
UniRef90_I6TMT1 : -ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQPIQ---------------------------------- : UniRef90_I6TMT1
: 1---------11--------21--------31--------41--------51--------61--------71--------81---- :
OrigSeq : MEKLVQPTPLLLSLLKSAGAQKETFTMKEVLYHLGQYIMAKQLYDEKQQHIVHCSNDPLGELFGVQEFSVKEHRRIYAMISRNLVS : OrigSeq
Jnet : --------HHHHHHHH-------EE-HHHHHHHHHHHHHHH---------EEE-------------------HHHHHHHH------ : Jnet
jhmm : ---EE---HHHHHHHHH------EE-HHHHHHHHHHHHH-----------EEE-------------------HHHHHHHH------ : jhmm
jpssm : --------HHHHHH---------EEEHHHHHHHHHHHHHHHH--------EEE--------------------HHHHHHH------ : jpssm
Lupas 14 : -------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : -------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : -------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : ---BB-B---BB-BB--B-B---BBBB-BBB-BB--BB----BB------BB-B----B--BB-B--BBB--B--BB--B---B-- : Jnet_25
Jnet_5 : ----------BB-BB---------BB---B---B---B-------------B-B----B----------------B---B------ : Jnet_5
Jnet_0 : ----------B---B--------------B---------------------------------------------B---------- : Jnet_0
Jnet Rel : 99811564334432421888875230688999999999931116788772452156645667777750136626888875168999 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.