SILENT_MODE BLOCK_FILE jp_DNU4ele.concise.blc MAX_NSEQ 1015 MAX_INPUT_LEN 1017 OUTPUT_FILE jp_DNU4ele.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 196 1004 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1005 196 1014 H SPACE SUB_CHARS 1 1005 196 1014 E SPACE SUB_CHARS 1 1005 196 1014 - SPACE STRAND 7 1008 12 COLOUR_TEXT_REGION 7 1008 12 1008 51 STRAND 51 1008 57 COLOUR_TEXT_REGION 51 1008 57 1008 51 STRAND 62 1008 67 COLOUR_TEXT_REGION 62 1008 67 1008 51 STRAND 93 1008 98 COLOUR_TEXT_REGION 93 1008 98 1008 51 STRAND 105 1008 110 COLOUR_TEXT_REGION 105 1008 110 1008 51 STRAND 134 1008 139 COLOUR_TEXT_REGION 134 1008 139 1008 51 HELIX 25 1008 38 COLOUR_TEXT_REGION 25 1008 38 1008 50 HELIX 77 1008 85 COLOUR_TEXT_REGION 77 1008 85 1008 50 HELIX 120 1008 128 COLOUR_TEXT_REGION 120 1008 128 1008 50 HELIX 158 1008 180 COLOUR_TEXT_REGION 158 1008 180 1008 50 HELIX 183 1008 191 COLOUR_TEXT_REGION 183 1008 191 1008 50 STRAND 7 1013 12 COLOUR_TEXT_REGION 7 1013 12 1013 51 STRAND 51 1013 58 COLOUR_TEXT_REGION 51 1013 58 1013 51 STRAND 62 1013 67 COLOUR_TEXT_REGION 62 1013 67 1013 51 STRAND 93 1013 98 COLOUR_TEXT_REGION 93 1013 98 1013 51 STRAND 105 1013 110 COLOUR_TEXT_REGION 105 1013 110 1013 51 STRAND 134 1013 138 COLOUR_TEXT_REGION 134 1013 138 1013 51 HELIX 24 1013 38 COLOUR_TEXT_REGION 24 1013 38 1013 50 HELIX 76 1013 85 COLOUR_TEXT_REGION 76 1013 85 1013 50 HELIX 120 1013 127 COLOUR_TEXT_REGION 120 1013 127 1013 50 HELIX 158 1013 180 COLOUR_TEXT_REGION 158 1013 180 1013 50 HELIX 183 1013 190 COLOUR_TEXT_REGION 183 1013 190 1013 50 STRAND 8 1014 12 COLOUR_TEXT_REGION 8 1014 12 1014 51 STRAND 51 1014 56 COLOUR_TEXT_REGION 51 1014 56 1014 51 STRAND 62 1014 67 COLOUR_TEXT_REGION 62 1014 67 1014 51 STRAND 92 1014 98 COLOUR_TEXT_REGION 92 1014 98 1014 51 STRAND 105 1014 110 COLOUR_TEXT_REGION 105 1014 110 1014 51 STRAND 135 1014 139 COLOUR_TEXT_REGION 135 1014 139 1014 51 HELIX 29 1014 38 COLOUR_TEXT_REGION 29 1014 38 1014 50 HELIX 78 1014 86 COLOUR_TEXT_REGION 78 1014 86 1014 50 HELIX 121 1014 128 COLOUR_TEXT_REGION 121 1014 128 1014 50 HELIX 150 1014 151 COLOUR_TEXT_REGION 150 1014 151 1014 50 HELIX 158 1014 181 COLOUR_TEXT_REGION 158 1014 181 1014 50 HELIX 183 1014 191 COLOUR_TEXT_REGION 183 1014 191 1014 50