SILENT_MODE BLOCK_FILE jp_ZC0rJ9v.concise.blc MAX_NSEQ 972 MAX_INPUT_LEN 974 OUTPUT_FILE jp_ZC0rJ9v.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 116 961 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 962 116 971 H SPACE SUB_CHARS 1 962 116 971 E SPACE SUB_CHARS 1 962 116 971 - SPACE STRAND 3 965 5 COLOUR_TEXT_REGION 3 965 5 965 51 STRAND 27 965 32 COLOUR_TEXT_REGION 27 965 32 965 51 STRAND 35 965 41 COLOUR_TEXT_REGION 35 965 41 965 51 STRAND 45 965 51 COLOUR_TEXT_REGION 45 965 51 965 51 STRAND 60 965 64 COLOUR_TEXT_REGION 60 965 64 965 51 STRAND 81 965 86 COLOUR_TEXT_REGION 81 965 86 965 51 STRAND 90 965 95 COLOUR_TEXT_REGION 90 965 95 965 51 STRAND 99 965 103 COLOUR_TEXT_REGION 99 965 103 965 51 HELIX 7 965 24 COLOUR_TEXT_REGION 7 965 24 965 50 HELIX 68 965 75 COLOUR_TEXT_REGION 68 965 75 965 50 STRAND 2 970 5 COLOUR_TEXT_REGION 2 970 5 970 51 STRAND 27 970 32 COLOUR_TEXT_REGION 27 970 32 970 51 STRAND 35 970 41 COLOUR_TEXT_REGION 35 970 41 970 51 STRAND 44 970 51 COLOUR_TEXT_REGION 44 970 51 970 51 STRAND 60 970 64 COLOUR_TEXT_REGION 60 970 64 970 51 STRAND 81 970 86 COLOUR_TEXT_REGION 81 970 86 970 51 STRAND 90 970 95 COLOUR_TEXT_REGION 90 970 95 970 51 STRAND 99 970 103 COLOUR_TEXT_REGION 99 970 103 970 51 HELIX 7 970 24 COLOUR_TEXT_REGION 7 970 24 970 50 HELIX 68 970 75 COLOUR_TEXT_REGION 68 970 75 970 50 STRAND 3 971 5 COLOUR_TEXT_REGION 3 971 5 971 51 STRAND 27 971 32 COLOUR_TEXT_REGION 27 971 32 971 51 STRAND 35 971 41 COLOUR_TEXT_REGION 35 971 41 971 51 STRAND 45 971 52 COLOUR_TEXT_REGION 45 971 52 971 51 STRAND 61 971 64 COLOUR_TEXT_REGION 61 971 64 971 51 STRAND 81 971 86 COLOUR_TEXT_REGION 81 971 86 971 51 STRAND 90 971 95 COLOUR_TEXT_REGION 90 971 95 971 51 STRAND 99 971 104 COLOUR_TEXT_REGION 99 971 104 971 51 HELIX 7 971 23 COLOUR_TEXT_REGION 7 971 23 971 50 HELIX 67 971 74 COLOUR_TEXT_REGION 67 971 74 971 50