QUERY : PICTNCCAGYKGCNYYSANGAFICEGQSDPKKPKACPLNCDPHIAYSKCPR : QUERY
UniRef90_Q00782 : PICTNCCAGYKGCNYYSANGTFICEGQSHPKNPKACPRNCDPHIAYSKCPR : UniRef90_Q00782
UniRef90_Q00782 : --CTTCCTGYTDCYYFGKDGKFVCEGES--IEPKACTLECDSRL------- : UniRef90_Q00782
UniRef90_K4BEX9 : PICTNCCAGFKGCNYYSAHGTFICEGQSDPRNPKACPRNCDPHIAYSKCPR : UniRef90_K4BEX9
UniRef90_K4BEX9 : --CTTCCTGYKGCYYFGKNGKFVCEGESD---------------------- : UniRef90_K4BEX9
UniRef90_UPI0002BC88C1 : PICTNCCAGFKGCNYYSAHGTFICEGQSDPRNPKACPRNCDPHIAYSKCPR : UniRef90_UPI0002BC88C1
UniRef90_UPI0002BC88C1 : PICTNCCSGFKGCNYYSADGTFICEGQSDPKKPRACHLNCDPHIAYSKCPR : UniRef90_UPI0002BC88C1
UniRef90_UPI0002BC88C1 : --CTTCCTGYKGCYYFGKNGKFVCEGESD--EPKPCTKEC-GHLGFGICPR : UniRef90_UPI0002BC88C1
UniRef90_UPI0002BC88C1 : --CTTCCTGYKGCYYFGKNGKFVCEGESD---------------------- : UniRef90_UPI0002BC88C1
UniRef90_Q6H238 : -ICTNCCAGTKGCNYFSADGTFVCKGESDPRNPKACPRNCDPRIDYRVCPR : UniRef90_Q6H238
UniRef90_Q6H238 : --CTNCCAGTKGCNYFSANGTFICEGEYDPRNPKACPRNCDPRIDYRVCPR : UniRef90_Q6H238
UniRef90_Q6H238 : -ICTNCCAGTKGYNYFSADGTFVCKGESDPRNPKACPRNCDPRIDYRFCPR : UniRef90_Q6H238
UniRef90_Q6H238 : -ICTNCCAGTMGCNYFSADGSFVCKGESDLRNPKDCPRNCDPRIDYRVCRR : UniRef90_Q6H238
UniRef90_Q6H238 : -ICTNCCVGTMGCNYFSADGSFVCKGESDLRNPKDCPRNCDPRIDYRVCRR : UniRef90_Q6H238
UniRef90_Q6H238 : --CTNCCAGTKGCNYFSANGTFICEGESE---------------------- : UniRef90_Q6H238
UniRef90_Q8W2K6 : PICTNCCSGYKGCNYYSAKGDLICEGESDPRNPKDCTFECDTQIAYSKCPR : UniRef90_Q8W2K6
UniRef90_Q8W2K6 : --CTTCCTGYQGCYYFDQDGDFVCEGES----------------------- : UniRef90_Q8W2K6
UniRef90_Q41488 : -ICTNCCAGYKGCNYYSANGAFICEGESDPKKPKACPRNCDPHIAYSKCPR : UniRef90_Q41488
UniRef90_Q41488 : --CTTCCTGYKGCYYFGKNGKFVCEGESDEPKANMYP-------------- : UniRef90_Q41488
UniRef90_P05119 : PICINCCSGYKGCNYYNSFGKFICEGESDPKRPNACTFNCDPNIAYSRCPR : UniRef90_P05119
UniRef90_P05119 : --CTTCCTGYKGCYYFGKDGKFVCEGESDEPKANMYP-------------- : UniRef90_P05119
UniRef90_Q1WL31 : -ICTNCCAGMKGCNYFSADGTFVCEGESDPRNPKPCPRNCDGRIAYGICPR : UniRef90_Q1WL31
UniRef90_Q1WL31 : -ICTNCCAGMKGCNYFSADGTFVCEGESDPINPKACPFNCDPRIAYGVCPR : UniRef90_Q1WL31
UniRef90_Q1WL31 : -ICTNCCAGTKGCSYFSADGTFVCKGESDPRNPKACPRNCDPRIDFGICP- : UniRef90_Q1WL31
UniRef90_Q1WL31 : -ICTNCCAGTKGCSYFSADGTFVCKGESDPRNPKACPRNCDPRIDFGICP- : UniRef90_Q1WL31
UniRef90_Q1WL31 : -ICTNCCAGRKGCSYFSADGTFVCKGESDPRNPKACPRNCDPRIDFGICP- : UniRef90_Q1WL31
UniRef90_Q1WL31 : -ICTNCYAGMKGCYYFSADGTFVCEGESDPRNPKPCPRNCDGRIAYGICPR : UniRef90_Q1WL31
UniRef90_Q1WL31 : -ICTNCCAGRKGCYYFSADGAFVCEGESDPKNPKACPRNCDGRIAFKVCPR : UniRef90_Q1WL31
UniRef90_Q1WL31 : -ICTNCCAGMKGCNYFSANGTFICEGESEYVN------------------- : UniRef90_Q1WL31
UniRef90_Q1WL41 : -ICTNCCAGTKGCNYFSDDGTFVCEGESDPRNPKACPRNCDPRIAYGICRR : UniRef90_Q1WL41
UniRef90_Q1WL41 : -ICTNCCAGTKGCKYFSYDGTFVCEGESDPRNPKACPRNCDGRIAYGICPR : UniRef90_Q1WL41
UniRef90_Q1WL41 : -ICTNCCAGRKGCNYFSADGTFVCEGESDPKNPKGCPRICDPRIAYRICRR : UniRef90_Q1WL41
UniRef90_Q1WL41 : -ICTNCCAGTKGCKYFSYDGNFVCEGESDPTNPKACPRNCDGRIAYEICPR : UniRef90_Q1WL41
UniRef90_Q1WL41 : -ICTNCCAGMKGCNYFSANGTFICEGESE---------------------- : UniRef90_Q1WL41
UniRef90_Q9M514 : -ICTNCCAGRKGCNYFSDIGTFICEGESHPNNPKACPRNCDTRIAYSK--- : UniRef90_Q9M514
UniRef90_Q9M514 : ---------------YSADGTFICEGESDPNNPKACPRNCD---------- : UniRef90_Q9M514
UniRef90_Q1WL43 : -ICTNCCAGTKGCKYFSDDGTFVCEGESDPRNPKACPRNCDPRIAYGICP- : UniRef90_Q1WL43
UniRef90_Q1WL43 : -ICTNCCAGKKGCKYFSDDGTFVCEGESDPRNPKACPRNCDGRIAYGICP- : UniRef90_Q1WL43
UniRef90_Q1WL43 : -ICTNCCAGKKGCKYFSDDGTFVCEGESDPRNPKACTLNCDPRIAYGICP- : UniRef90_Q1WL43
UniRef90_Q1WL43 : -ICTNCCAGKKGCKYFSNDGTFVCEGESDPRNPKACTLNCDPRIAYGICP- : UniRef90_Q1WL43
UniRef90_Q1WL43 : -ICTNCCAGTKGCKYFSDDETFVCEGESDPRNPEACPRNCDPRIAYGICP- : UniRef90_Q1WL43
UniRef90_Q1WL43 : -ICTNCCAGKKGCKYFSDDGTFICEGESE---------------------- : UniRef90_Q1WL43
UniRef90_T1PZE6 : -ICTNCCAGRKGCNYYSADGTFICEGESDPNNPKACPRYCDTRIAYSKCPR : UniRef90_T1PZE6
UniRef90_T1PZE6 : -ICTNCCAGRKGCNYYSADGTFICEGESDPNNPKACPRNCDPNIAYSLC-- : UniRef90_T1PZE6
UniRef90_T1PZE6 : -------------------------GESDPNNPKACPRYCDTRIAYSKCPR : UniRef90_T1PZE6
UniRef90_D2CGT6 : -ICTNCCAGRKGCNYYSADGTFICEGESDPNNPKACPRYCDTRIAYSKCPR : UniRef90_D2CGT6
UniRef90_D2CGT6 : -LCTNCCAGRKGCNYYSADGTFICEGESDPNNPKACPRNCDTRIAYSLC-- : UniRef90_D2CGT6
UniRef90_Q40561 : PICTTCCAGYKGCNYYSANGTFICEGSSDPKNPNVCPQFCDPDIAYSKCPR : UniRef90_Q40561
UniRef90_Q40561 : --CTTCCTGYKGCYYFGQDGEFVCEGESD--EPKSCTTECDPRVATISCP- : UniRef90_Q40561
UniRef90_M1DJV3 : PICINCCAGYKGCNYYSANGTFICEGKSDPRKPNTCPKNCDSKIVYSKCP- : UniRef90_M1DJV3
UniRef90_M1DJV3 : --CTSCCTGYKGCYYFDLDGKFVCEGKRS--EPKICTQQCDPKVAYMICP- : UniRef90_M1DJV3
UniRef90_Q1WL45 : -LCTNCCAGKKGCNYFSDDGTFICEGESDPNNPKDCPRNCDGRIAYGICP- : UniRef90_Q1WL45
UniRef90_Q1WL45 : -ICTNCCSGTKGCRFFSANGTFVCEGESDPRNPKACPLNCDPRIAIGICP- : UniRef90_Q1WL45
UniRef90_Q1WL45 : --CTNCCAGTKGCNYFSYDGTFVCEGESDPRNPKFCPQNCDGRIAYGICP- : UniRef90_Q1WL45
UniRef90_Q1WL45 : -LCTNCCAGTKGCRFFSADGTFVCEGESDPRNPKACPLNCDPRIATGICP- : UniRef90_Q1WL45
UniRef90_Q1WL45 : -LCTNCCAGAKGCRFFSADGTFVCEGESDPRNPKFCPLNCDPRIASGIC-- : UniRef90_Q1WL45
UniRef90_Q1WL45 : -ICTNCCSGKKGCKYFSDDGTFVCEGETE---------------------- : UniRef90_Q1WL45
UniRef90_E9JGT0 : -ICTNCCAGKKGCMYFSNDGTFICEGESEPVDNKPCPRNCDGRIAYGICP- : UniRef90_E9JGT0
UniRef90_E9JGT0 : -ICTNCCAGKKGCLYFSNDGTFICEGESEYVSEN----------------- : UniRef90_E9JGT0
UniRef90_K4D750 : -ICTNCCAGKKGCNYFSANGTFICEGESDNNHGKPCPRNCDPRIAYAICPH : UniRef90_K4D750
UniRef90_K4D750 : -ICINCCAGKKGCNYFSADGTFICEGESEYVSEKHCPRNCDPRIAYVICPR : UniRef90_K4D750
UniRef90_K4D750 : -ICTNCCAGKKGCYYFSVDGTFICEGESDYVSKKACPFNCDPRITYGICPH : UniRef90_K4D750
UniRef90_K4D750 : -ICTNCCAGKKRCNYFSADGTFICEGESDNNHGKPCP-----RIAYVICPR : UniRef90_K4D750
UniRef90_K4D750 : -ICTNCCTGKKGCNYFSADGTSNCEGE------------------------ : UniRef90_K4D750
UniRef90_M1AJ81 : -ICINCCSGFKECKYFSKDYTLICDGESDWESRKACSKECDRRIEFGIC-- : UniRef90_M1AJ81
UniRef90_P01078 : -ICTNCCAGRKGCSYFSEDGTFICKGESNPENPKACPRNCDGRIAYGICP- : UniRef90_P01078
UniRef90_B0FZ75 : -ICINCCSGFKECKYFSKDYTFICDGESDWESRKACSKECDRRIEIGIC-- : UniRef90_B0FZ75
UniRef90_B0FZ75 : -LCTTCSAGKKGCKYFNNNGTYICDGEYEW--------------------- : UniRef90_B0FZ75
UniRef90_E9JGT1 : -ICTNCCAGKKGCMYFSDDGTFICEGESEPVDNKPCPRNCDGRIAYGICP- : UniRef90_E9JGT1
UniRef90_E9JGT1 : -ICTNCCAGKKGCMYFSNDGTFICEGESEPVDNKPCPRNCDGRIAYGICP- : UniRef90_E9JGT1
UniRef90_E9JGT1 : -ICTNCCAGKKGCLYFSNDGTFICEGESE---------------------- : UniRef90_E9JGT1
UniRef90_Q43710 : -LCTNCCAGKKGCKYFSKDGTYICDGESEWVSEKACTKECDTRIDFGICP- : UniRef90_Q43710
UniRef90_Q43710 : -LCTNCCAGKKGCKYFSKDGTYICDGESEWVSEKDCTKECDTRIDFGICP- : UniRef90_Q43710
UniRef90_Q43710 : -LCTNCCAGKKGCKYFSADGTYICDGESEWVS------------------- : UniRef90_Q43710
UniRef90_P84813 : -ICTNCCAGTKGCNTTSANGAFICEGQSDPKKPKACPLNCDPHIAYA---- : UniRef90_P84813
UniRef90_M1AJ80 : --CTNCCSGTEGCNYFSANGTFICEGQTKKETNKVCPFNCNPRIAYSICP- : UniRef90_M1AJ80
UniRef90_M1AJ80 : -ICTNCCAGKKGCNYFSTDGTFVCEGESKVKS------------------- : UniRef90_M1AJ80
UniRef90_I3QHE9 : ---------------YNSFGKFICEGESDPKRPNACTFNCDPNIAYSRCPR : UniRef90_I3QHE9
UniRef90_I3QHE9 : --CTTCCTGYKGCYYFGKDGKFVCEGESDEPKANMYP-------------- : UniRef90_I3QHE9
UniRef90_K4D752 : ------CSGIVGCKYFSKDYTFICDGESKWFGEKAYTKECDPRIDIGIC-- : UniRef90_K4D752
UniRef90_K4D752 : ALCTNCCAGKKGCNYFDENGTFICEGESEGEN------------------- : UniRef90_K4D752
: 1---------11--------21--------31--------41-------- :
OrigSeq : PICTNCCAGYKGCNYYSANGAFICEGQSDPKKPKACPLNCDPHIAYSKCPR : OrigSeq
Jnet : -------------EEE-----EEEE-------------------------- : Jnet
jhmm : -------------EEE-----EEEE-------------------------- : jhmm
jpssm : -------------EEE----EEEE--------------------------- : jpssm
Lupas 14 : --------------------------------------------------- : Lupas 14
Lupas 21 : --------------------------------------------------- : Lupas 21
Lupas 28 : --------------------------------------------------- : Lupas 28
Jnet_25 : --B--BB-B--BB-BB---B-BBB-B---------B---B---B-B--B-- : Jnet_25
Jnet_5 : --B--BB-----B--------BBB---------------B----------- : Jnet_5
Jnet_0 : --B--B--------------------------------------------- : Jnet_0
Jnet Rel : 998776677776425437761675167776667777777776665567889 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.