SILENT_MODE BLOCK_FILE jp_DfqjAHx.concise.blc MAX_NSEQ 469 MAX_INPUT_LEN 471 OUTPUT_FILE jp_DfqjAHx.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 240 458 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 459 240 468 H SPACE SUB_CHARS 1 459 240 468 E SPACE SUB_CHARS 1 459 240 468 - SPACE STRAND 10 462 16 COLOUR_TEXT_REGION 10 462 16 462 51 STRAND 38 462 46 COLOUR_TEXT_REGION 38 462 46 462 51 STRAND 59 462 62 COLOUR_TEXT_REGION 59 462 62 462 51 STRAND 88 462 93 COLOUR_TEXT_REGION 88 462 93 462 51 STRAND 105 462 114 COLOUR_TEXT_REGION 105 462 114 462 51 STRAND 128 462 136 COLOUR_TEXT_REGION 128 462 136 462 51 STRAND 140 462 150 COLOUR_TEXT_REGION 140 462 150 462 51 STRAND 165 462 173 COLOUR_TEXT_REGION 165 462 173 462 51 STRAND 178 462 184 COLOUR_TEXT_REGION 178 462 184 462 51 STRAND 192 462 200 COLOUR_TEXT_REGION 192 462 200 462 51 STRAND 206 462 213 COLOUR_TEXT_REGION 206 462 213 462 51 STRAND 226 462 236 COLOUR_TEXT_REGION 226 462 236 462 51 HELIX 63 462 72 COLOUR_TEXT_REGION 63 462 72 462 50 HELIX 160 462 162 COLOUR_TEXT_REGION 160 462 162 462 50 STRAND 4 467 5 COLOUR_TEXT_REGION 4 467 5 467 51 STRAND 10 467 16 COLOUR_TEXT_REGION 10 467 16 467 51 STRAND 38 467 47 COLOUR_TEXT_REGION 38 467 47 467 51 STRAND 59 467 62 COLOUR_TEXT_REGION 59 467 62 467 51 STRAND 88 467 93 COLOUR_TEXT_REGION 88 467 93 467 51 STRAND 106 467 114 COLOUR_TEXT_REGION 106 467 114 467 51 STRAND 128 467 136 COLOUR_TEXT_REGION 128 467 136 467 51 STRAND 140 467 149 COLOUR_TEXT_REGION 140 467 149 467 51 STRAND 162 467 163 COLOUR_TEXT_REGION 162 467 163 467 51 STRAND 165 467 173 COLOUR_TEXT_REGION 165 467 173 467 51 STRAND 178 467 184 COLOUR_TEXT_REGION 178 467 184 467 51 STRAND 192 467 201 COLOUR_TEXT_REGION 192 467 201 467 51 STRAND 206 467 213 COLOUR_TEXT_REGION 206 467 213 467 51 STRAND 226 467 236 COLOUR_TEXT_REGION 226 467 236 467 51 HELIX 63 467 72 COLOUR_TEXT_REGION 63 467 72 467 50 HELIX 159 467 161 COLOUR_TEXT_REGION 159 467 161 467 50 STRAND 3 468 3 COLOUR_TEXT_REGION 3 468 3 468 51 STRAND 9 468 15 COLOUR_TEXT_REGION 9 468 15 468 51 STRAND 37 468 46 COLOUR_TEXT_REGION 37 468 46 468 51 STRAND 59 468 63 COLOUR_TEXT_REGION 59 468 63 468 51 STRAND 87 468 93 COLOUR_TEXT_REGION 87 468 93 468 51 STRAND 104 468 114 COLOUR_TEXT_REGION 104 468 114 468 51 STRAND 128 468 136 COLOUR_TEXT_REGION 128 468 136 468 51 STRAND 140 468 150 COLOUR_TEXT_REGION 140 468 150 468 51 STRAND 165 468 173 COLOUR_TEXT_REGION 165 468 173 468 51 STRAND 178 468 184 COLOUR_TEXT_REGION 178 468 184 468 51 STRAND 192 468 199 COLOUR_TEXT_REGION 192 468 199 468 51 STRAND 206 468 213 COLOUR_TEXT_REGION 206 468 213 468 51 STRAND 226 468 236 COLOUR_TEXT_REGION 226 468 236 468 51 HELIX 64 468 71 COLOUR_TEXT_REGION 64 468 71 468 50 HELIX 160 468 162 COLOUR_TEXT_REGION 160 468 162 468 50