SILENT_MODE BLOCK_FILE jp_zU6Qq3N.concise.blc MAX_NSEQ 616 MAX_INPUT_LEN 618 OUTPUT_FILE jp_zU6Qq3N.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 216 605 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 606 216 615 H SPACE SUB_CHARS 1 606 216 615 E SPACE SUB_CHARS 1 606 216 615 - SPACE STRAND 12 609 15 COLOUR_TEXT_REGION 12 609 15 609 51 STRAND 21 609 22 COLOUR_TEXT_REGION 21 609 22 609 51 STRAND 31 609 33 COLOUR_TEXT_REGION 31 609 33 609 51 STRAND 60 609 62 COLOUR_TEXT_REGION 60 609 62 609 51 STRAND 74 609 78 COLOUR_TEXT_REGION 74 609 78 609 51 STRAND 103 609 110 COLOUR_TEXT_REGION 103 609 110 609 51 STRAND 116 609 124 COLOUR_TEXT_REGION 116 609 124 609 51 STRAND 143 609 147 COLOUR_TEXT_REGION 143 609 147 609 51 STRAND 153 609 159 COLOUR_TEXT_REGION 153 609 159 609 51 STRAND 175 609 183 COLOUR_TEXT_REGION 175 609 183 609 51 STRAND 194 609 203 COLOUR_TEXT_REGION 194 609 203 609 51 STRAND 207 609 209 COLOUR_TEXT_REGION 207 609 209 609 51 HELIX 89 609 98 COLOUR_TEXT_REGION 89 609 98 609 50 STRAND 12 614 16 COLOUR_TEXT_REGION 12 614 16 614 51 STRAND 21 614 22 COLOUR_TEXT_REGION 21 614 22 614 51 STRAND 31 614 32 COLOUR_TEXT_REGION 31 614 32 614 51 STRAND 59 614 63 COLOUR_TEXT_REGION 59 614 63 614 51 STRAND 74 614 78 COLOUR_TEXT_REGION 74 614 78 614 51 STRAND 103 614 110 COLOUR_TEXT_REGION 103 614 110 614 51 STRAND 116 614 124 COLOUR_TEXT_REGION 116 614 124 614 51 STRAND 143 614 147 COLOUR_TEXT_REGION 143 614 147 614 51 STRAND 153 614 160 COLOUR_TEXT_REGION 153 614 160 614 51 STRAND 175 614 182 COLOUR_TEXT_REGION 175 614 182 614 51 STRAND 194 614 203 COLOUR_TEXT_REGION 194 614 203 614 51 STRAND 208 614 209 COLOUR_TEXT_REGION 208 614 209 614 51 HELIX 89 614 97 COLOUR_TEXT_REGION 89 614 97 614 50 STRAND 13 615 15 COLOUR_TEXT_REGION 13 615 15 615 51 STRAND 21 615 23 COLOUR_TEXT_REGION 21 615 23 615 51 STRAND 30 615 34 COLOUR_TEXT_REGION 30 615 34 615 51 STRAND 75 615 77 COLOUR_TEXT_REGION 75 615 77 615 51 STRAND 103 615 110 COLOUR_TEXT_REGION 103 615 110 615 51 STRAND 117 615 124 COLOUR_TEXT_REGION 117 615 124 615 51 STRAND 144 615 146 COLOUR_TEXT_REGION 144 615 146 615 51 STRAND 153 615 158 COLOUR_TEXT_REGION 153 615 158 615 51 STRAND 175 615 183 COLOUR_TEXT_REGION 175 615 183 615 51 STRAND 194 615 203 COLOUR_TEXT_REGION 194 615 203 615 51 STRAND 206 615 209 COLOUR_TEXT_REGION 206 615 209 615 51 HELIX 12 615 12 COLOUR_TEXT_REGION 12 615 12 615 50 HELIX 89 615 98 COLOUR_TEXT_REGION 89 615 98 615 50