Characterised Kinomes
Subsets of kinome data can be retrieved via the
Data format
Data is available as fasta files of the peptide sequence corresponding to the kinase domains. The header line of each sequence is a tab separated list comprising seq id, species, [start aa - stop aa], kinase family, best HMM match, best significance score
Analysed Kinomes
TaxonomyDescriptionHaploid Genome
Size (Mb)
Predicted genesPredicted peptidesSource databaseCompletion
Fungi
Aspergillus fumigatusHuman pathogen causing invasive aspergillosis24.999269630TIGR2005
Aspergillus nidulansModel fungus for genetics and cell biology30950010701Broad Institute2005
Aspergillus nigerBiotechnology (fermentation)33.91416511200JGI2007
Aspergillus oryzaeUsed to ferment soy371207412074Nite Japan2005
Candida glabrataHuman pathogen causing candidiasis12.352835215Genolevures2004
Cryptococcus neoformansHuman pathogen causing cryptococcosis2065006578Stanford Genome Technology Centre2005
Debaryomyces hanseniiCryotolerant marine yeast12.269066319Genolevures2004
Kluyveromyces lactis"Genetic studies, industrial applications"10-1253295327Genolevures2004
Magnaporthe griseaPlant pathogen37.81110911109Broad Institute2005
Neurospora crassa"Red bread mold model fungus"40100829822Broad Institute2003
Phanerochaete chrysosporiumLignin degrading white-rot fungus301177710048JGI2004
Ustilago maydisPathogen of maize20.565226522Broad Institute2006
Yarrowia lipolyticaMethane-using yeast used in genetic research2067036436Genolevures2004
Plants
Arabidosis thalianaWild mustard; model plant1202549830690Arabidopsis Information Resource2000
Cyanidioschyzon merolaeRed alga; simple eukaryote16.553315014Tokyo Univ.2004
Oryza sativa ssp. JaponicaRice; crop and model organism46646022-5561566710TIGR2002
Ostreococcus lucimarinusGreen alga; simple eukaryote13.276517651JGI2007
Ostreococcus tauriGreen alga; simple eukaryote12.678927892Ghent Univ.2006
Populus trichocarpaBlack cottonwood tree; model tree5504555558036JGI2006
Diatoms
Thalassiosira pseudonanaDiatom2.51124211390JGI2004
Amoebozoa
Entamoeba histolyticaHuman pathogenic protozoan causing amoebic dysentry23.899389772TIGR2005
Metazoans - Animals
Aedes aegyptiYellow fever mosquito13761541916789ENSEMBL2007
Bombyx moriSilk worm5301851021302SilkDB2004
Anopheles gambiaeMalaria mosquito vector27.81368313133ENSEMBL2002
Canis familiarisCommon dog24001930025559ENSEMBL2005
Ciona intestinalisTunicate; simple chordate116.71600019858ENSEMBL2002
Gallus gallusChicken100020-2300022195ENSEMBL2004
Macaca mulattaRhesus monkey29002308136423ENSEMBL2007
Monodelphis domesticaOpossum; first marsupial genome34751855032612ENSEMBL2007
Oryzias latipesMedaka fish700.31400125107ENSEMBL2007
Pan troglodytesChimpanzee; closest human relative31002195032834ENSEMBL2005
Rattus norvegicusRat; model mammal27502116633438ENSEMBL2004
Takifugu rubripesPuffer fish; vertebrate with small genome39022-2900021974ENSEMBL2002
Tetraodon nigroviridisPuffer fish; vertebrate with small genome3852865328005ENSEMBL2004