There are several other programs that are useful to have when using STAMP:
DSSP -- Definition of Secondary Structure in Proteins, Kabsch & Sander. Contact
Dr Chris Sander
E.M.B.L.
Meyerhofstr. 1
D-69117 Heidelberg
Germany
Tel: +49(6221)387361
Fax: +49(6221)387517
or see the WWW page: http://www.sander.embl-heidelberg.de/dssp/
DEFINE -- Defines secondary structure in proteins, and can be used on PDB files containing
only 
atoms (DSSP won't). To obtain a copy, contact:
Dr Fred M. Richards
Department of Molecular Biophysics and Biochemistry
Yale University
P.O. Box 6666
260 Whitney Avenue
New Haven, CT 06511
USA
ALSCRIPT -- displays alignments in PostScript format, contact GJB (see address above)
WWW page: http://www.compbio.dundee.ac.uk/
MOLSCRIPT -- displays PDB structures in PostScript format, contact:
Dr Per Kraulis
Center for Structural Biochemistry
Karolinska Institute
Novum
S-141 57 Huddinge
SWEDEN
Tel: +46 8 608 9266
Fax: +46 8 608 9290
email: pjk@oyster.csb.ki.se
WWW page: http://www.unige.ch/crystal/prg-molscript.html