# LaTeX2HTML 95.1 (Fri Jan 20 1995)
# Associate image original text (scrambled) with physical files.

$key = q/{_inline}$int_B${_inline}/;
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$key = q/{_inline}$dag${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img103.gif">'; 
$key = q/{table}[p]bfTable4Numberofemndomainproteinscentertabular|ll|hlineNo.ofdomainsinprotein;SPM_amp;Numberofoccurrenceshline1;SPM_amp;1292;SPM_amp;343;SPM_amp;64;SPM_amp;35;SPM_amp;06;SPM_amp;1hlinetabularcenter{table}/;
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$key = q/{table}[p]bfTable3Tableofdomainslistedascorrectthathavemajordifferencetothedefineddefinitioncentertabular|lcl|hlineBrookhavencode;SPM_amp;chain;SPM_amp;Whyisthereadifference?hline1aai;SPM_amp;A;SPM_amp;isincorrectlyclassedasasingledomainwhichis;SPM_amp;;SPM_amp;madeupoffoursegments.1gst;SPM_amp;A;SPM_amp;isincorrectlyclassedasasingledomain.1ipd;SPM_amp;-;SPM_amp;issplitintotwo`domain-likeparts',exceptforthefact;SPM_amp;;SPM_amp;thatasheetissplit.1wsy;SPM_amp;B;SPM_amp;bothdefinitionssplitthisintotwodomains,butthetwo;SPM_amp;;SPM_amp;definitionsarequitedissimilar3mt2;SPM_amp;-;SPM_amp;Thisisatwodomainproteinwitheachdomaincontaining;SPM_amp;;SPM_amp;about30residues.hlinetabularcenter{table}/;
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$key = q/{_inline}$3.3pm2.2;contactsresidue${_inline}/;
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$key = q/{_inline}$1leqi;SPM_lt;N${_inline}/;
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$key = q/{_inline}$et;al.${_inline}/;
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$key = q/{_inline}$N^22${_inline}/;
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$key = q/{_inline}$geqMSS${_inline}/;
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$key = q/{_inline}$N^44${_inline}/;
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$key = q/{_inline}$(i+1)${_inline}/;
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$key = q/{table}[p]bfTable5Numberofemnsegmentdomainscentertabular|ll|hlineNo.ofsegmentsindomain;SPM_amp;Numberofoccurrenceshline1;SPM_amp;1902;SPM_amp;413;SPM_amp;14;SPM_amp;1hlinetabularcenter{table}/;
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$key = q/{_inline}$k_2${_inline}/;
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$key = q/{_inline}$l_1${_inline}/;
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$key = q/{_inline}$beta${_inline}/;
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$key = q/{_inline}$l_2${_inline}/;
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$key = q/{_inline}$geqMDS${_inline}/;
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$key = q/{_inline}$emA_1${_inline}/;
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$key = q/{_inline}$emA_2${_inline}/;
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$key = q/{_inline}$10.3pm6.6;contactsresidue${_inline}/;
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$key = q/{_inline}$x_1${_inline}/;
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$key = q/{_inline}$(int_Aext_AB)*(int_Bext_AB)${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img8.gif">'; 
$key = q/{_inline}$x_2${_inline}/;
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$key = q/{_inline}$y_1${_inline}/;
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$key = q/{_inline}$y_2${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img60.gif">'; 
$key = q/{}ddag{}/;
$cached_env_img{$key} ='<IMG  ALIGN=BOTTOM ALT="" SRC="img101.gif">'; 
$key = q/{_inline}$x_1^max${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img41.gif">'; 
$key = q/{_inline}$y_1^max${_inline}/;
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$key = q/{_inline}$x_2^max${_inline}/;
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$key = q/{_inline}$y_2^max${_inline}/;
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$key = q/{_inline}$(2N_1)(2N_2)=4N_1N_2${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img98.gif">'; 
$key = q/{_inline}$B_1${_inline}/;
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$key = q/{_inline}$ext_AB${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img11.gif">'; 
$key = q/{_inline}$emA${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=BOTTOM ALT="" SRC="img54.gif">'; 
$key = q/{_inline}$B_2${_inline}/;
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$key = q/{_inline}$emA^max${_inline}/;
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$key = q/{_inline}$emB^max${_inline}/;
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$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img96.gif">'; 
$key = q/{_inline}$geqMNCC${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img85.gif">'; 
$key = q/{_inline}$N_2${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img97.gif">'; 
$key = q/{_inline}$24pm7;contactsresidue${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img90.gif">'; 
$key = q/{table}[p]bfTable6TableofConstraintscentertabular|llll|hlineConstraint;SPM_amp;Sub-Division;SPM_amp;FullName;SPM_amp;Valuehline_inline$MDS$_inline;SPM_amp;;SPM_amp;MinimumDomainSize;SPM_amp;40residueshline_inline$MNCC$_inline;SPM_amp;_inline$MNCCm$_inline;SPM_amp;MinimumNoContactCut-offmiddleofchain;SPM_amp;30residues;SPM_amp;_inline$MNCCe$_inline;SPM_amp;MinimumNoContactCut-offofchain;SPM_amp;10residueshline_inline$MSS$_inline;SPM_amp;_inline$MSSm$_inline;SPM_amp;MinimumSegmentSizemiddleofchain;SPM_amp;25residues;SPM_amp;_inline$MSSe$_inline;SPM_amp;MinimumSegmentSizeofchain;SPM_amp;5residueshline_inline$sso$_inline;SPM_amp;;SPM_amp;Ifpercentageofsecondarystructureis;SPM_amp;57%;SPM_amp;;SPM_amp;greaterthanthisonlyusesecondary;SPM_amp;;SPM_amp;;SPM_amp;structurecontacts;SPM_amp;hline_inline$MSV$_inline;SPM_amp;_inline$MSV$_inline;SPM_amp;MinimumSplitValue;SPM_amp;9.5;SPM_amp;_inline$MSVsso$_inline;SPM_amp;MinimumSplitValueusing;SPM_amp;17.05;SPM_amp;;SPM_amp;onlysecondarystructurecontacts;SPM_amp;;SPM_amp;_inline$MSVcs$_inline;SPM_amp;MinimumSplitValueforchoppedsegments;SPM_amp;60.0hline_inline$BW$_inline;SPM_amp;;SPM_amp;_inline$beta$_inlinesheetWeighting;SPM_amp;0.1hline_inline$HCD$_inline;SPM_amp;;SPM_amp;Reducecontactdensityof;SPM_amp;10.32;SPM_amp;;SPM_amp;helixtothisvalue;SPM_amp;contactsresiduehline_inline$MDSP$_inline;SPM_amp;;SPM_amp;Minimumsizeofsegmentforadoublesplit;SPM_amp;120residueshline_inline$MAC$_inline;SPM_amp;;SPM_amp;MaximumAllowedCompactness;SPM_amp;2.85AAhline_inline$ID$_inline;SPM_amp;;SPM_amp;IncrementDivider;SPM_amp;250residueshlinetabularcenter{table}/;
$cached_env_img{$key} ='<IMG  ALIGN=BOTTOM ALT="" SRC="img109.gif">'; 
$key = q/{_inline}$int_A${_inline}/;
$cached_env_img{$key} ='<IMG  ALIGN=MIDDLE ALT="" SRC="img9.gif">'; 

1;