[Jalview-discuss] fetch of multiple PDB sequences

James Procter jimp at compbio.dundee.ac.uk
Tue Apr 7 12:41:50 BST 2009


Hello Maria.

I do apologise - you've hit a bug which was actually fixed several
months ago in the development version of jalview, but was not backported
to the latest build of the release version.

The latest build of the current release branch is now building, and it
includes this fix. See the version archive for the links to the
different builds (http://www.jalview.org/versions.html).

sorry!
Jim.

Maria Luisa Rodrigues wrote:
> Dear all,
> 
> I'm trying to load multiple sequences from PDB database, but jalview  
> is not recognizing the multiple accession codes that I'm giving as  
> input to the sequence fetcher!
> 
> When I give  2GZD;2HV8 as input, I get the following message:
> "Error retrieving the 2GZD;2HV8 from PDB"
> 
> It seems that it is not using the semi-colon to separate different  
> codes...
> 
> Thanks in advance,
> 
> Luisa Rodrigues


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J. B. Procter  (ENFIN/VAMSAS)  Barton Bioinformatics Research Group
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