[Jalview-discuss] export pictures of overview and via command-line

Albert Vilella avilella at gmail.com
Thu Apr 1 12:31:40 BST 2010


hi, I am also interested in this feature! :-)

2010/4/1 Timothée Flutre <timothee.flutre at versailles.inra.fr>:
> Hello,
>  I have two questions:
>
> 1) I would like to export the overview of the MSA as a picture. Is it
> possible within Jalview, ie without taking a screencast? If yes, is it
> possible to do via the command-line?
>
> 2) Similarly, when I export a picture of the MSA via the command-line, I run
> this command:
> $ java -Djava.ext.dirs=XXX/lib -cp XXX/jalview.jar jalview.bin.Jalview -open
> myMsa.afa -png myPicture.png
> But is it possible to do so without having Jalview opening the window?
>
> Thanks in advance,
> Tim
>
>
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