[Jalview-discuss] Loading .jar file error

[Jim Procter]

Hi Jean.

I've not worked out what the problem is with your file, but I do have a 
workaround.

The symptom I see is that whilst I can load the file into jalview 2.5 
without any exceptions, but the alignment panel isn't updated when I 
move the horizontal scroll bar to the left or the right.

The workaround is to press 'Ctrl-T' - which will open up a new view - 
this one should work as normal. Once the new view is created you can 
close the other view (select it's tab, then press Ctrl-W).

I hope this helps!  Hopefully I'll find the bug before I make the next 
release...
Jim.


On 25/05/2010 10:24, Jean Muller wrote:
>
>>> Hi,
>>> I have one protein alignment that I am editing manually since weeks and
>>> which jalview 2.5 does not seems to be able to open anymore... I 
>>> used to
>>> have 2.4 on my windows machine which I updated recently.
>>>
>>> The file was .jar file which I choose to be able to keep features to 
>>> the
>>> MSA.
>>>
>>> I have 2.4 on Linux which seems to be able to open it (so no file
>>> corruption).
>>>
>>> What shall I do? I do not want to lose my annotations and hope the jar
>>> format from Jalview should be compatible. Any ideas? I can provide the
>>> .jar file.
>>>
>>> Thanks in advance
>>>
>>> Cheers,
>>>
>>> Jean

-- 
-------------------------------------------------------------------
J. B. Procter  (JALVIEW/ENFIN)  Barton Bioinformatics Research Group
Phone/Fax:+44(0)1382 388734/345764  http://www.compbio.dundee.ac.uk
The University of Dundee is a Scottish Registered Charity, No. SC015096.