[Jalview-discuss] feature request: display secondary structure of known structures

[Thomas Evangelidis]

Dear developers,

may I request to add an option that can display the secondary  
structure elements (SSEs) of every sequence with known structure below  
(or above) the alignment? In conjunction with secondary structure  
prediction by Jpred, the user could adjust the alignment to eliminate  
disruption of SSEs in the unknown sequences. With this feature Jalview  
could become the ultimate commercial free alignment editor for  
comparative modeling.

best regards,
Thomas