[Jalview-discuss] Fwd: feature groups, feature labels

[Jim Procter]

  Hi again Patrick.

I've been thinking about the problem you're having a bit more. The quick 
(and clunky) workaround to ensure all features are displayed is to hide 
*all* groups, and then display the groups you want.

However - I suspect you'll agree this is quite imprecise, and the API 
could really do with functions like :

Jalview.getFeatureState(boolean state);
Jalview.setFeatureState(String listoffeaturetypes,boolean state);
Jalview.setFeatureDisplayOrder(String listoffeaturetypesInOrder);
Jalview.getFeatureDisplayOrder();

Feel free to comment on the issue here: 
http://issues.jalview.org/browse/JAL-630

Jim.