[Jalview-discuss] Associating a PDB file with a sequence in the sequence features file

Itamar Borukhov itamarb at compugen.co.il
Mon Feb 28 15:16:43 GMT 2011


Is it possible to associate a PDB file with a sequence in the sequence
features file?

I use the standalone (non-browser) Jalview application and many of the
sequences I show in Jalview actually represent PDB chains. I create the
multiple sequence alignment , features and annotation files via a script
and in such a case I thought that it would be very natural to associate
these sequences with a PDB file already in the features file as a
non-positional sequence feature.




Itamar Borukhov, Ph.D., 
Principal Scientist, Algorithmic Research
Research & Development
Compugen Ltd., 
72 Pinchas Rosen, Tel Aviv 69512, Israel 
Email: itamarb(at)cgen.com 
Web:   http://www.cgen.com <http://www.cgen.com/>  
Tel:   +972-3-765-8523 
Fax:   +972-3-765-8555 



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