[Jalview-discuss] PCA

Jessica Richard jricks224 at yahoo.com
Fri Jan 25 21:50:48 GMT 2013


I use the PCA calculation within Jalview to analyze a variety of sequence motifs. I would like to report the percentage of points that fit to the principal components. I see eigen values in the output files, but is there a way to determine the percentage of points as a way to report the quality of the PCA?

Thanks,
Jessica
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