[Jalview-discuss] New version Stuck on Loading Data

Mungo Carstairs (Staff) g.m.carstairs at dundee.ac.uk
Wed Jan 6 09:00:03 GMT 2016

Hi Rob,

Just to eliminate one possible problem - I notice the data file is in RTF format and includes control characters. Jalview expects only plain text files.

Are you able to generate the file as plain text, and does that make a difference?

Though having said that, I can load your RTF file into Jalview (Desktop or applet), albeit with the control characters rendered as extra 'nonsense' sequences - so this may not be the root of your problem. Is there a public link to your site / applet?



Mungo Carstairs
Jalview Computational Scientist
The Barton Group
Division of Computational Biology
School of Life Sciences
University of Dundee, Dundee, Scotland, UK.

From: jalview-discuss-bounces at jalview.org <jalview-discuss-bounces at jalview.org> on behalf of Rob Wieck <rwieck at nd.edu>
Sent: 05 January 2016 20:47
To: jalview-discuss at jalview.org
Subject: [Jalview-discuss] New version Stuck on Loading Data

To whom it may concern,

We have a site that has the jalviewApplet.jar applet installed that pulls a file from a page within the same domain.

The previous versions worked, but after we upgraded to the most recent version after the certificate expired last November, it was no longer able to load data, it just hangs on 'Loading Data' (screenshot attached).

I have attached the file that gets passed to the applet.


Rob Wieck
Research Programmer
Center for Research Computing
University of Notre Dame

The University of Dundee is a registered Scottish Charity, No: SC015096
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