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jprocter 2010-09-06 17:37

new XML representation for web services parameters

68 lines of code changed in:

• schemas: JalviewWsParamSet.xsd (new 68)

jprocter 2010-04-30 10:39

jalview 2.5 release banner

47 lines of code changed in:

• schemas: JalviewUserColours.xsd (+17 -18), castor-mapping.xsd (changed), jalview.xsd (+15 -17), jalviewJvV1.xsd (changed), vamsas.xsd (+15 -17), vamsasJvV1.xsd (changed)

jprocter 2010-04-14 15:35

profile visualizations are now logos

2 lines of code changed in:

• schemas: jalview.xsd (+2 -2)

jprocter 2010-04-05 16:34

extend XML model for graduated feature colours, group associated manual/auto annotation, consensus profile/histograms, annotation label formatting, viewport highlight follow/select message receive settings

59 lines of code changed in:

• schemas: jalview.xsd (+24 -2), vamsas.xsd (+35 -15)

jprocter 2010-04-02 15:41

extended Colour element with additional optional attributes for graduated colour

18 lines of code changed in:

• schemas: JalviewUserColours.xsd (+18 -1)

jprocter 2009-06-08 11:29

apply gpl development license

72 lines of code changed in:

• schemas: JalviewUserColours.xsd (+34 -15), castor-mapping.xsd (changed), jalview.xsd (+19), jalviewJvV1.xsd (changed), vamsas.xsd (+19), vamsasJvV1.xsd (changed)

jprocter 2009-03-31 17:38

prototype for store/restore of feature colour gradient settings

10 lines of code changed in:

• schemas: jalview.xsd (+10 -1)

jprocter 2009-02-06 14:51

added showUnconserved property to group and view attributes

3 lines of code changed in:

• schemas: jalview.xsd (+3)

jprocter 2008-12-15 10:31

structureState element to structure view Id is a many to one relationship - so viewId cannot be an XML element ID.

9 lines of code changed in:

• schemas: jalview.xsd (+9 -1)

jprocter 2008-11-12 11:18

jalview XML schema update for 2.4.1 (or 2.5?) introducing IDs for views and treepanels and proper reconstruction of dataset/Alignment relationships

22 lines of code changed in:

• schemas: jalview.xsd (+13), vamsas.xsd (+9 -3)

jprocter 2008-02-22 16:32

sequenceId is a string, not an integer - allows generation of unlimited unique sequential sequence Ids

2 lines of code changed in:

• schemas: jalview.xsd (+2 -2)

jprocter 2007-08-30 12:38

added aligned codon frames, and dataset reference ids for sequenceSet and sequences to project xml

166 lines of code changed in:

• schemas: vamsas.xsd (+166 -34)

jprocter 2007-05-28 10:57

castor mapping file schema (for mappings in resources dir) - this is put in for development documentation purposes.

0 lines of code changed in:

• schemas: castor-mapping.xsd (new)

jprocter 2007-05-24 16:16

jalview 2.0 XML schema versions for backwards compatibility in future castor upgrades

0 lines of code changed in:

• schemas: jalview.nodesc.properties (new), jalviewJvV1.xsd (new), vamsasJvV1.xsd (new)

jprocter 2007-05-17 18:09

updated source generator properties for castor-1.1

0 lines of code changed in:

• schemas: jalview.properties (changed)

andrew 2007-05-16 10:16

visible

1 lines of code changed in:

• schemas: vamsas.xsd (+1)

andrew 2007-05-01 11:03

Seqset properties saved

6 lines of code changed in:

• schemas: vamsas.xsd (+6)

jprocter 2007-04-26 18:10

total annotation score is a double for maximum precision.

1 lines of code changed in:

• schemas: vamsas.xsd (+1 -1)

jprocter 2007-04-25 12:47

AlignmentAnnotation: added annotation score attribute and allowed for annotation[] array to be null

84 lines of code changed in:

• schemas: vamsas.xsd (+84 -82)

jprocter 2007-04-02 14:05

added feature type order preference attribute and visible feature group state element

201 lines of code changed in:

• schemas: jalview.properties (new), jalview.xsd (+201 -194)

(27 more)