Directory src/jalview/ext/jmol/

Directory Created:
2010-06-29 17:19
Total Files:
1
Deleted Files:
0
Lines of Code:
1545

[root]/src/jalview/ext/jmol

Lines of Code

src/jalview/ext/jmol/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
jprocter 15 (100.0%) 1915 (100.0%) 127.6

Most Recent Commits

jprocter 2010-09-14 16:49

streamlined app and applet jmol console + event handling via component listener

29 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+29 -60)
jprocter 2010-09-13 22:03

refactored to remove App reference in Applet (JAL-638)

61 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+61 -47)
jprocter 2010-09-13 20:55

refactored to remove App reference in Applet (JAL-638)

6 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+6 -2)
jprocter 2010-09-13 19:24

patched Jmol and code for embedding JmolAppConsole in a JPanel (JAL-638)

94 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+94 -2)
jprocter 2010-09-08 15:12

todos & added simple method for other classes to monitor when fileUpdate events have occured

17 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+17 -2)
jprocter 2010-09-02 13:31

increment if strings *dont* match

2 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+2 -2)
jprocter 2010-08-31 17:16

fixed various null pointer exceptions that occur when PDB files imported into Jmol which do not map to a sequence. Notes re JAL-623

121 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+121 -72)
jprocter 2010-08-27 16:43

patch for structures with multiple models, and refactored seq/str binding methods

151 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+151 -4)
jprocter 2010-08-27 14:02

1.2 compatibility

4 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+4 -3)
jprocter 2010-08-27 12:34

revised sequence/structure binding so one structure associated with x-seuqenceI's, and bugfixed superposition code(See JAL-583)

199 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+199 -49)
jprocter 2010-08-25 15:13

correct initing of JmolViewer to avoid security exception in unsigned applet moed

16 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+16 -3)
jprocter 2010-08-20 13:32

refactor jmol api so it doesn't clash with Swing component method. * JAL-582

4 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+4 -4)
jprocter 2010-08-20 12:54

extend jmol binding handles selection events and add in a 'refreshPdbEntries' step so the list of PDB entries jalview knows about can be updated before a Jmol notifyUpdate event is handled

101 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+101 -72)
jprocter 2010-08-18 11:15

refactor to abstract jmol/jalview binding and applet and application specific sequence structure binding.

286 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (+286 -48)
jprocter 2010-06-29 17:19

new abstract proxy for use by applet and application

824 lines of code changed in:

  • src/jalview/ext/jmol: JalviewJmolBinding.java (new 824)
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