Building RNA version '-r Release_2_5_Branch'
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/analysis/SequenceIdMatcher.java:232: warning: unmappable character for encoding UTF8
private String WORD_SEP = "~. |#\\/<>!\"�$%^*)}[@',?_";
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/bin/JalviewLite.java:45: warning: unmappable character for encoding UTF8
* @return String list of selected sequence IDs, each terminated by "�"
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/bin/JalviewLite.java:57: warning: unmappable character for encoding UTF8
* ("�" as default)
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/bin/JalviewLite.java:67: warning: unmappable character for encoding UTF8
* @return String list of selected sequence IDs, each terminated by "�"
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/bin/JalviewLite.java:72: warning: unmappable character for encoding UTF8
return getSelectedSequencesFrom(alf, "�");
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/bin/JalviewLite.java:81: warning: unmappable character for encoding UTF8
* separator string to use - default is "�"
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/bin/JalviewLite.java:90: warning: unmappable character for encoding UTF8
sep = "�";
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/bin/Jalview.java:674: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class for a varargs call
cast to java.lang.Class[] for a non-varargs call and to suppress this warning
Constructor gbcons = gbindingc.getConstructor(null);
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/bin/Jalview.java:675: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
Object gbinding = gbcons.newInstance(null);
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/gui/Desktop.java:1771: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class for a varargs call
cast to java.lang.Class[] for a non-varargs call and to suppress this warning
Constructor gccons = gcClass.getConstructor(null);
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/gui/Desktop.java:1775: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class for a varargs call
cast to java.lang.Class[] for a non-varargs call and to suppress this warning
java.lang.reflect.Method run = gcClass.getMethod("run", null);
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/gui/Desktop.java:1776: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
Object gc = gccons.newInstance(null);
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/gui/Desktop.java:1779: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
run.invoke(gc, null);
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/ws/seqfetcher/ASequenceFetcher.java:239: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Class for a varargs call
cast to java.lang.Class[] for a non-varargs call and to suppress this warning
Object proxyObj = dbSourceProxy.getConstructor(null)
^
/cluster/gjb_lab/NOBACK/fc/ws-dev1/live/cruisecontrol/checkout/rna-jalview/src/jalview/ws/seqfetcher/ASequenceFetcher.java:240: warning: non-varargs call of varargs method with inexact argument type for last parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
.newInstance(null);
^
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
15 warnings
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