#!/bin/sh

# header change script - thanks to Steve Searle and the
# EBI developers mailing list for help with this one

echo "Please enter where your version of perl is (e.g. /usr/local/bin/perl)"
echo "Try not to type this in wrong - nothing will work :-)"

read pants
echo "Changing files to $pants... hang on..."

for file in getpssm getfreq msf2jnet gethmm hmm2profile
do
        sed -e s:CHANGEJNET:$pants: $file > dohjnet
	mv dohjnet $file
	chmod +x $file
done
echo "all done"
