Please read and understand the LICENCE file prior to use.


 DOMAK  is Copyright (1996) Asim S. Siddiqui and Geoffrey J. Barton

 All use of the DOMAK must cite:
 Siddiqui, A. S. and Barton, G. J., "Continuous and Discontinuous Domains: An
 Algorithm for the Automatic Generation of Reliable Protein Domain Definitions" 
 PROTEIN SCIENCE, 4:872-884 (1995).

There may be  pre-compiled executables for IRIX 5.3 in bin/sg

The Makefiles etc are all written for a Silicon Graphics IRIX 5.3
If you are using a different machine you may need to change the name
of the C compiler to ANSI C if that is not the default compiler

type BUILD to make the executables (ignore warnings about params multiply defined
and qsort).
All executables are copied to the bin directory

Please read documentation in doc/

The files doc/LICENSE and doc/appendix_A are the text
files corresponding to the licence.


Contents of this directory:

BUILD*               top-level Makefile
README               this file
contacts-src/        contains source for contacts programs
doc/                 documentation
domak-src/           domak source
include/             include file
libs/                contains libraries
screens/             contains source for screens
def/                 contains defaults
bin/                 binaries (pre-compiled or created by user)


AS May 1996
Changes by GJB March 2000

