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Extracting the IDentifier codes for the top scoring sequences

The /ID option allows the identifier codes to be extracted from a file. The resulting file contains SCORE ID pairs with the score expressed in an integer form suitable for input to the program SELECT.

For example:



ENTER FILE TO PROCESS: bash_ge_4_scan1.top20/ID

ENTER NUMBER OF IDS TO WRITE OUT: 20

ENTER FILE FOR ID'S: bash_ge_4_scan1.top20id

1=MATCH, 2=NAS, 3=RMEAN, 4=RSD, 5=SCORE


ENTER CHOICE  :1       
USING:      1

READING DATA FILE
    20 DATASETS READ IN
PERFORMING SORT
DATA SORTED
WRITING SORTED FILE
SORTED FILE WRITTEN

Generate prolog clauses? [N]: <return>

Giving the following file: bash_ge_4_scan1.top20id



15314 HZPG            
15257 HZCZ            
15257 HZHU            
15142 HACHPE          
14957 HADKP           
14900 HEMSY2          
14800 HBRB3           
14728 HBPY            
14714 HBFG3T          
14700 HBMSH0          
14686 HBTG            
14686 HBTTP           
14671 HGMQJ           
14671 HGMQP           
14671 HGMQR           
14671 HGBAY           
14671 HGHUA           
14671 HGMKS           
14657 HBOR            
14657 HEGT1


gjb@bioch.ox.ac.uk