3 Dee - Database of Protein Domain Definitions


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The current cluster is formed at a score of 2.357

Ascend tree (bring in more domains)

Classes% of representative set
undefined 14.29
Alpha and beta (a/b) 14.29
Alpha and beta (a+b) 71.43
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 14.29 0.16
Alpha and beta (a/b)
Glycinamide ribonucleotide transformylase Domain II from 3Dee 14.29 0.36
Alpha and beta (a+b)
FAD/NAD-linked reductases, dimerisation (C-terminal) domain from 3Dee 28.57 1.04
N-terminal domain of enolase & muconate-lactonizing enzyme from 3Dee 42.86 1.55

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1garb-2 [seq. related domains] Alpha and beta (a/b) Glycinamide ribonucleotide transformylase Domain II
1mucb-1 [seq. related domains] Alpha and beta (a+b) N-terminal domain of enolase & muconate-lactonizing enzyme
1dtn-1 [seq. related domains] Alpha and beta (a+b) N-terminal domain of enolase & muconate-lactonizing enzyme
2oneb-1 [seq. related domains] Alpha and beta (a+b) N-terminal domain of enolase & muconate-lactonizing enzyme
2prp-1 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1joa-3 [seq. related domains] Alpha and beta (a+b) FAD/NAD-linked reductases, dimerisation (C-terminal) domain
3grt-3 [seq. related domains] Alpha and beta (a+b) FAD/NAD-linked reductases, dimerisation (C-terminal) domain

Enter PDB code - optionally suffixing the code with the chain id.


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