3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 3.201

Ascend tree (bring in more domains)

Classes% of representative set
undefined 20.00
All alpha 80.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 20.00 0.47
All alpha
Apolipophorin-III from SCOP 6.67 0.49
Four-helical up-and-down bundle from SCOP 66.67 4.93
Transducin (alpha subunit), insertion domain from SCOP 6.67 0.49

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1aep-1 [seq. related domains] All alpha Apolipophorin-III
1eged-3 [seq. related domains] All alpha Four-helical up-and-down bundle
1as3-2 [seq. related domains] All alpha Transducin (alpha subunit), insertion domain

Cluster 2

Descend tree into cluster 2

1hr3a-1 [seq. related domains] All alpha Four-helical up-and-down bundle
256ba-1 [seq. related domains] All alpha Four-helical up-and-down bundle
1hr3b-1 [seq. related domains] All alpha Four-helical up-and-down bundle
1vls-1 [seq. related domains] All alpha Four-helical up-and-down bundle
1nfo-1 [seq. related domains] All alpha Four-helical up-and-down bundle
1hr3c-1 [seq. related domains] All alpha Four-helical up-and-down bundle
1jafb-1 [seq. related domains] All alpha Four-helical up-and-down bundle
1knyb-2 [seq. related domains] All alpha Four-helical up-and-down bundle
1hmdb-1 [seq. related domains] All alpha Four-helical up-and-down bundle
1agrh-1 [seq. related domains] undefined undefined
2a0b-1 [seq. related domains] undefined undefined
1nsgb-1 [seq. related domains] undefined undefined

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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