3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 1.873

Ascend tree (bring in more domains)

Classes% of representative set
undefined 30.77
Alpha and beta (a+b) 7.69
All alpha 61.54
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 30.77 0.63
Alpha and beta (a+b)
Urease, gamma-subunit from SCOP 7.69 0.52
All alpha
Annexin Domain from 3Dee 15.38 0.99
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin from SCOP 23.08 1.48
EF-hand from 3Dee 15.38 0.99
Thymidine phosphorylase Domain I from 3Dee 7.69 0.49

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1aeif-3 [seq. related domains] All alpha Annexin Domain
1aeif-2 [seq. related domains] All alpha Annexin Domain
1hyp-1 [seq. related domains] All alpha Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
1hssd-1 [seq. related domains] All alpha Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
1jtb-1 [seq. related domains] All alpha Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
1wdca-2 [seq. related domains] All alpha EF-hand
2mysa-4 [seq. related domains] All alpha EF-hand
1tpt-1 [seq. related domains] All alpha Thymidine phosphorylase Domain I
1occu-1 [seq. related domains] undefined undefined
1pnbb-1 [seq. related domains] undefined undefined
1ns1b-1 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1a5oa-1 [seq. related domains] Alpha and beta (a+b) Urease, gamma-subunit
1al04-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

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