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|
3 Dee - Database of Protein Domain Definitions |
| Classes | % of representative set |
|---|---|
| undefined | 35.48 |
| Peptides | 3.23 |
| Alpha and beta (a/b) | 3.23 |
| All alpha | 58.06 |
| Breakdown into folds | % of cluster | % of class |
|---|---|---|
| undefined | ||
| undefined from 3Dee | 35.48 | 1.73 |
| Peptides | ||
| Transmembrane helical fragments from 3Dee | 3.23 | 2.04 |
| Alpha and beta (a/b) | ||
Barstar (barnase inhibitor) | 3.23 | 0.36 |
| All alpha | ||
| 4-helical cytokines Short chain | 3.23 | 0.49 |
| Acyl-CoA binding protein from 3Dee | 3.23 | 0.49 |
| Anaphylotoxins (complement system) | 3.23 | 0.49 |
| Citrate synthase Domain II | 6.45 | 0.99 |
| FIS protein from 3Dee | 3.23 | 0.49 |
| Four-helical up-and-down bundle | 3.23 | 0.49 |
| Heme-linked catalases C-terminal domain | 3.23 | 0.49 |
| Hemocyanin, N-terminal domain | 6.45 | 0.99 |
| Immunoglobulin-binding protein A, fragment B from 3Dee | 3.23 | 0.49 |
| Long alpha-hairpin | 9.68 | 1.48 |
| Oligomers of long helices from 3Dee | 3.23 | 0.49 |
| ROP protein from 3Dee | 3.23 | 0.49 |
| Restriction endonucleases helical domain from 3Dee | 3.23 | 0.49 |
| Spectrin repeat unit from 3Dee | 3.23 | 0.49 |
| 1vlk-1 | [seq. related domains] | All alpha |
4-helical cytokines Short chain |
| 2abd-1 | [seq. related domains] | All alpha |
Acyl-CoA binding protein |
| 1cfaa-1 | [seq. related domains] | All alpha |
Anaphylotoxins (complement system) |
| 1f36b-1 | [seq. related domains] | All alpha |
FIS protein |
| 1lbid-3 | [seq. related domains] | All alpha |
Four-helical up-and-down bundle |
| 1spzz-1 | [seq. related domains] | All alpha |
Immunoglobulin-binding protein A, fragment B |
| 1ktq-2 | [seq. related domains] | All alpha |
Long alpha-hairpin |
| 1grj-1 | [seq. related domains] | All alpha |
Long alpha-hairpin |
| 1kfd-2 | [seq. related domains] | All alpha |
Long alpha-hairpin |
| 1afd3-1 | [seq. related domains] | All alpha |
Oligomers of long helices |
| 1gtoa-1 | [seq. related domains] | All alpha |
ROP protein |
| 1pvib-1 | [seq. related domains] | All alpha |
Restriction endonucleases helical domain |
| 2spcb-2 | [seq. related domains] | All alpha |
Spectrin repeat unit |
| 1bhb-1 | [seq. related domains] | Peptides |
Transmembrane helical fragments |
| 1afob-1 | [seq. related domains] | undefined |
undefined |
| 1tdtc-1 | [seq. related domains] | undefined |
undefined |
| 1ab3-1 | [seq. related domains] | undefined |
undefined |
| 1beo-1 | [seq. related domains] | undefined |
undefined |
| 1lre-1 | [seq. related domains] | undefined |
undefined |
| 1aikn-1 | [seq. related domains] | undefined |
undefined |
| 1tbgh-1 | [seq. related domains] | undefined |
undefined |
| 2hp8-1 | [seq. related domains] | undefined |
undefined |
| 1sknp-1 | [seq. related domains] | undefined |
undefined |
| 1ajyb-2 | [seq. related domains] | undefined |
undefined |
| 1a19b-1 | [seq. related domains] | Alpha and beta (a/b) |
Barstar (barnase inhibitor) |
| 1aj8b-2 | [seq. related domains] | All alpha |
Citrate synthase Domain II |
| 3cts-2 | [seq. related domains] | All alpha |
Citrate synthase Domain II |
| 8cata-3 | [seq. related domains] | All alpha |
Heme-linked catalases C-terminal domain |
| 1hc2-1 | [seq. related domains] | All alpha |
Hemocyanin, N-terminal domain |
| 1nol-1 | [seq. related domains] | All alpha |
Hemocyanin, N-terminal domain |
| 1sly-2 | [seq. related domains] | undefined |
undefined |