3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 2.685

Ascend tree (bring in more domains)

Classes% of representative set
Alpha and beta (a+b) 16.67
All alpha 83.33
Breakdown into folds% of cluster % of class
Alpha and beta (a+b)
Nucleotidyltransferases Domain II from 3Dee 16.67 0.52
All alpha
lambda repressor-like DNA-binding domains from SCOP 83.33 2.46

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

2bpgb-3 [seq. related domains] Alpha and beta (a+b) Nucleotidyltransferases Domain II

Cluster 1

Descend tree into cluster 1

1adr-1 [seq. related domains] All alpha lambda repressor-like DNA-binding domains
2r63-1 [seq. related domains] All alpha lambda repressor-like DNA-binding domains
1au7b-1 [seq. related domains] All alpha lambda repressor-like DNA-binding domains
1lmb4-1 [seq. related domains] All alpha lambda repressor-like DNA-binding domains
1ner-1 [seq. related domains] All alpha lambda repressor-like DNA-binding domains

Enter PDB code - optionally suffixing the code with the chain id.

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