3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 4.016

Ascend tree (bring in more domains)

Classes% of representative set
undefined 33.33
Small proteins 16.67
All alpha 50.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 33.33 0.31
Small proteins
Crambin-like from SCOP 16.67 0.87
All alpha
DNA-binding 3-helical bundle from 3Dee 50.00 1.48

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1ab1-1 [seq. related domains] Small proteins Crambin-like

Cluster 1

Descend tree into cluster 1

1hcra-1 [seq. related domains] All alpha DNA-binding 3-helical bundle
1a5j-1 [seq. related domains] All alpha DNA-binding 3-helical bundle
1pdnc-1 [seq. related domains] All alpha DNA-binding 3-helical bundle
1wjdb-1 [seq. related domains] undefined undefined
1tc3c-1 [seq. related domains] undefined undefined

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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