3 Dee - Database of Protein Domain Definitions

[Search] [HELP]

The current cluster is formed at a score of 4.337

Ascend tree (bring in more domains)

Classes% of representative set
undefined 14.29
All alpha 85.71
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 14.29 0.16
All alpha
DNA-binding 3-helical bundle from 3Dee 85.71 2.96

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

2lfb-1 [seq. related domains] All alpha DNA-binding 3-helical bundle
1pdnc-2 [seq. related domains] All alpha DNA-binding 3-helical bundle
2ezi-1 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1akha-2 [seq. related domains] All alpha DNA-binding 3-helical bundle
1vnd-1 [seq. related domains] All alpha DNA-binding 3-helical bundle
1hdp-1 [seq. related domains] All alpha DNA-binding 3-helical bundle
1akha-1 [seq. related domains] All alpha DNA-binding 3-helical bundle

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

3dee@compbio.dundee.ac.uk