3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 2.150

Ascend tree (bring in more domains)

Classes% of representative set
undefined 42.86
All alpha 57.14
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 42.86 0.47
All alpha
Mu transposase, DNA-binding domain from 3Dee 14.29 0.49
Nucleotidyltransferases Domain III from 3Dee 14.29 0.49
small domain attached to TIM barrel from 3Dee 14.29 0.49
the C-terminal domain of RNA polymerase alpha subunit from 3Dee 14.29 0.49

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1tnt-1 [seq. related domains] All alpha Mu transposase, DNA-binding domain
1bpza-1 [seq. related domains] All alpha Nucleotidyltransferases Domain III
1exnb-2 [seq. related domains] undefined undefined
1taq-2 [seq. related domains] undefined undefined
1cuk-2 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1cec-2 [seq. related domains] All alpha small domain attached to TIM barrel
1coo-1 [seq. related domains] All alpha the C-terminal domain of RNA polymerase alpha subunit

Enter PDB code - optionally suffixing the code with the chain id.

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