3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 0.200

Ascend tree (bring in more domains)

Classes% of representative set
undefined 27.27
Alpha and beta (a+b) 63.64
All beta 9.09
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 27.27 0.47
Alpha and beta (a+b)
Creatinase/methionine aminopeptidase from 3Dee 18.18 1.04
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain from SCOP 18.18 1.04
Sugar phosphatases alpha+beta N terminal domain from 3Dee 27.27 1.55
All beta
beta-Roll from SCOP 9.09 0.45

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1af0a-2 [seq. related domains] All beta beta-Roll

Cluster 1

Descend tree into cluster 1

1chmb-2 [seq. related domains] Alpha and beta (a+b) Creatinase/methionine aminopeptidase
1xgo-1 [seq. related domains] Alpha and beta (a+b) Creatinase/methionine aminopeptidase
1drw-2 [seq. related domains] Alpha and beta (a+b) Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
1fsab-1 [seq. related domains] Alpha and beta (a+b) Sugar phosphatases alpha+beta N terminal domain
1inp-1 [seq. related domains] Alpha and beta (a+b) Sugar phosphatases alpha+beta N terminal domain
1awbb-1 [seq. related domains] Alpha and beta (a+b) Sugar phosphatases alpha+beta N terminal domain
1ospo-1 [seq. related domains] undefined undefined
1ofgf-2 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1a7kd-2 [seq. related domains] Alpha and beta (a+b) Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
1vaob-3 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

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