3 Dee - Database of Protein Domain Definitions

The current cluster is formed at a score of 0.213

Ascend tree (bring in more domains)

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• Classes

• Alpha and beta (a+b) folds
• Alpha and beta (a/b) folds
• undefined folds

• Cluster 1
• Cluster 2

Breakdown into folds	% of cluster	% of class
undefined
undefined from 3Dee	9.09	0.31
Alpha and beta (a/b)
Cytidine deaminase from SCOP	9.09	0.73
Ribonuclease H-like motif from SCOP	68.18	5.47
Thiolase Domain I from 3Dee	4.55	0.36
Alpha and beta (a+b)
FAD-linked reductases, C-terminal domain from SCOP	9.09	1.04

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

3cox-2	[seq. related domains]	Alpha and beta (a+b)	FAD-linked reductases, C-terminal domain
1gal-3	[seq. related domains]	Alpha and beta (a+b)	FAD-linked reductases, C-terminal domain
1pxtb-1	[seq. related domains]	Alpha and beta (a/b)	Thiolase Domain I
1jfrb-1	[seq. related domains]	undefined	undefined

Cluster 2

Descend tree into cluster 2

1af2a-2	[seq. related domains]	Alpha and beta (a/b)	Cytidine deaminase
1af2a-1	[seq. related domains]	Alpha and beta (a/b)	Cytidine deaminase
2yhx-2	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1kvc-1	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1hlua-1	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1glbg-2	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1hjrd-1	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1hkbb-3	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1chmb-1	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1vsj-1	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1dkgd-2	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1bcmb-1	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
2yhx-3	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1hlua-2	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
2itg-1	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1dkgd-1	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1hmva-5	[seq. related domains]	Alpha and beta (a/b)	Ribonuclease H-like motif
1hmva-4	[seq. related domains]	undefined	undefined

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