3 Dee - Database of Protein Domain Definitions


[Search] [HELP]

The current cluster is formed at a score of 0.161

Ascend tree (bring in more domains)

Go to (document sections)

Classes% of representative set
undefined 30.38
Multi-domain (alpha and beta) 0.34
Alpha and beta (a/b) 64.85
Alpha and beta (a+b) 4.44
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 30.38 13.99
Multi-domain (alpha and beta)
p-Hydroxybenzoate hydroxylase as a single domain from 3Dee 0.34 12.50
Alpha and beta (a/b)
ATP pyrophosphatases from 3Dee 1.37 1.46
Aconitase, Domain I from 3Dee 0.34 0.36
Aconitase, Domain II from 3Dee 0.34 0.36
Aconitase, Domain III from 3Dee 0.34 0.36
Aspartate carbamoyltransferase, Catalytic-chain from 3Dee 0.68 0.73
Biotin carboxylase N-terminal domain-like from SCOP 1.02 1.09
CheB methylesterase domain (C-terminal residues 152-349) from 3Dee 0.34 0.36
Class I glutamine amidotransferases from 3Dee 0.34 0.36
Cytidine deaminase from SCOP 0.68 0.73
Dihydrofolate reductases from SCOP 0.68 0.73
FAD (also NAD)-binding motif from 3Dee 3.75 4.01
Ferredoxin reductase-like, C-terminal NADP-linked domain from SCOP 1.37 1.46
Flavodoxin-like from SCOP 4.44 4.74
Glucosamine 6-phosphate deaminase from SCOP 0.34 0.36
Glutaminase/Asparaginase Domain I from 3Dee 0.34 0.36
Glutaminase/Asparaginase Domain II from 3Dee 0.34 0.36
Glycinamide ribonucleotide transformylase Domain I from 3Dee 0.34 0.36
Integrin A (or I) domain from SCOP 0.34 0.36
Interleukin-1beta converting enzyme (a cysteine protease) from 3Dee 0.34 0.36
Leucine aminopeptidase, N-terminal domain from SCOP 0.34 0.36
N-carbamoylsarcosine amidohydrolase from 3Dee 0.34 0.36
NAD(P)-binding Rossmann-fold domains from SCOP 4.44 4.74
Nitrogenase iron-molybdenum protein, alpha and beta chains domain III from 3Dee 0.68 0.73
Nitrogenase iron-molybdenum protein, alpha chain domain I from 3Dee 0.34 0.36
Nitrogenase iron-molybdenum protein, beta and alpha chains domain II from 3Dee 0.34 0.36
Nitrogenase iron-molybdenum protein, beta chain domain I from 3Dee 0.34 0.36
P-loop containing nucleotide triphosphate hydrolases from SCOP 3.41 3.65
PLP-dependent transferases Domain II from 3Dee 1.02 1.09
PLP-dependent transferases Domain III from 3Dee 0.34 0.36
Periplasmic binding protein-like I Domain I from 3Dee 2.05 2.19
Periplasmic binding protein-like I Domain II from 3Dee 1.71 1.82
Periplasmic binding protein-like II Domain I from 3Dee 3.07 3.28
Periplasmic binding protein-like II Domain II from 3Dee 3.41 3.65
Phosphofructokinase Domain I from 3Dee 0.34 0.36
Phosphofructokinase Domain II from 3Dee 0.34 0.36
Phosphoglucomutase, first 3 domains from SCOP 1.02 1.09
Phosphoglycerate kinase Domain I from 3Dee 0.68 0.73
Phosphoglycerate kinase Domain II from 3Dee 0.68 0.73
Phosphoribosyltransferases (PRTases) from 3Dee 1.02 1.09
Phosphotyrosine protein phosphatases I from 3Dee 0.34 0.36
Pyruvate kinase, C-terminal domain from SCOP 0.68 0.73
Pyruvate oxidase and decarboxylase, middle domain from 3Dee 0.68 0.73
Restriction endonucleases from 3Dee 0.34 0.36
Rhodanese from 3Dee 0.68 0.73
Ribonuclease H-like motif from SCOP 5.12 5.47
S-adenosyl-L-methionine-dependent methyltransferases Domain I from 3Dee 0.34 0.36
Subtilases from SCOP 0.34 0.36
Sugar phosphatases alpha/beta C terminal domain from 3Dee 1.02 1.09
The "swivelling" beta/beta/alpha domain from SCOP 1.02 1.09
Thiamin-binding from 3Dee 1.71 1.82
Thiolase Domain I from 3Dee 0.34 0.36
Thiolase Domain II from 3Dee 0.34 0.36
Thioredoxin-like from 3Dee 2.39 2.55
Thymidine phosphorylase Domain II - Rossmann-fold like from 3Dee 0.34 0.36
Transketolase, C-terminal domain from 3Dee 0.34 0.36
Trimethylamine dehydrogenase, middle domain from 3Dee 0.34 0.36
Tryptophan synthase, beta-subunit Domain I from 3Dee 0.34 0.36
Tryptophan synthase, beta-subunit Domain II from 3Dee 0.34 0.36
Type I DNA topoisomerase Rossmann-fold like domain from 3Dee 0.34 0.36
Uracil-DNA glycosylase from 3Dee 0.34 0.36
alpha/beta-Hydrolases from SCOP 2.73 2.92
beta-Glucosyltransferase & glycogen phosphorylase Domain I from 3Dee 0.34 0.36
beta-Glucosyltransferase & glycogen phosphorylase Domain II from 3Dee 0.34 0.36
Alpha and beta (a+b)
Bacteriophage T7 lysozyme (Zn amidase) from SCOP 0.34 0.52
Cysteine proteinases Domain II from 3Dee 0.34 0.52
D-amino acid aminotransferase Domain II from 3Dee 0.34 0.52
FAD-linked reductases, C-terminal domain from SCOP 0.68 1.04
Gelsolin-like (actin-severing protein) from 3Dee 0.34 0.52
Metzincins, catalytic (N-terminal) domain from 3Dee 1.71 2.59
P-loop containing nucleotide triphosphate hydrolases, small a+b insert from 3Dee 0.34 0.52
Ribosomal protein S5 domain 2-like from SCOP 0.34 0.52

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1af2a-2 [seq. related domains] Alpha and beta (a/b) Cytidine deaminase
1af2a-1 [seq. related domains] Alpha and beta (a/b) Cytidine deaminase
3cox-2 [seq. related domains] Alpha and beta (a+b) FAD-linked reductases, C-terminal domain
1gal-3 [seq. related domains] Alpha and beta (a+b) FAD-linked reductases, C-terminal domain
1kvc-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1hlua-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1glbg-2 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1hjrd-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1hkbb-3 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1chmb-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1vsj-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1dkgd-2 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1bcmb-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
2yhx-3 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1hlua-2 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
2itg-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
2yhx-2 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1dkgd-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1hmva-5 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1pxtb-1 [seq. related domains] Alpha and beta (a/b) Thiolase Domain I
1hmva-4 [seq. related domains] undefined undefined
1jfrb-1 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

2aim-2 [seq. related domains] Alpha and beta (a+b) Cysteine proteinases Domain II
1iaa-2 [seq. related domains] Alpha and beta (a+b) Metzincins, catalytic (N-terminal) domain
1esp-1 [seq. related domains] Alpha and beta (a+b) Metzincins, catalytic (N-terminal) domain
1kuh-1 [seq. related domains] Alpha and beta (a+b) Metzincins, catalytic (N-terminal) domain
2ayk-1 [seq. related domains] Alpha and beta (a+b) Metzincins, catalytic (N-terminal) domain
2aigp-1 [seq. related domains] Alpha and beta (a+b) Metzincins, catalytic (N-terminal) domain
1elo-4 [seq. related domains] Alpha and beta (a+b) Ribosomal protein S5 domain 2-like
1aonn-3 [seq. related domains] Alpha and beta (a/b) The "swivelling" beta/beta/alpha domain
1bayb-1 [seq. related domains] Alpha and beta (a/b) Thioredoxin-like
1mek-1 [seq. related domains] Alpha and beta (a/b) Thioredoxin-like
1acvb-1 [seq. related domains] Alpha and beta (a/b) Thioredoxin-like
1prxb-1 [seq. related domains] Alpha and beta (a/b) Thioredoxin-like
1gp1b-1 [seq. related domains] Alpha and beta (a/b) Thioredoxin-like
1grx-1 [seq. related domains] Alpha and beta (a/b) Thioredoxin-like
1aazb-1 [seq. related domains] Alpha and beta (a/b) Thioredoxin-like
1aua-1 [seq. related domains] undefined undefined
1qbb-2 [seq. related domains] undefined undefined
1lml-1 [seq. related domains] undefined undefined
1ois-1 [seq. related domains] undefined undefined
1gnwb-1 [seq. related domains] undefined undefined
2trcp-2 [seq. related domains] undefined undefined
1fohd-4 [seq. related domains] undefined undefined

Cluster 3

Descend tree into cluster 3

1gln-1 [seq. related domains] Alpha and beta (a/b) ATP pyrophosphatases
3ts1-1 [seq. related domains] Alpha and beta (a/b) ATP pyrophosphatases
1qtqa-1 [seq. related domains] Alpha and beta (a/b) ATP pyrophosphatases
1gpmd-5 [seq. related domains] Alpha and beta (a/b) ATP pyrophosphatases
1atq-2 [seq. related domains] Alpha and beta (a/b) Aconitase, Domain II
1akmc-1 [seq. related domains] Alpha and beta (a/b) Aspartate carbamoyltransferase, Catalytic-chain
1akmc-2 [seq. related domains] Alpha and beta (a/b) Aspartate carbamoyltransferase, Catalytic-chain
1lba-1 [seq. related domains] Alpha and beta (a+b) Bacteriophage T7 lysozyme (Zn amidase)
1gsh-1 [seq. related domains] Alpha and beta (a/b) Biotin carboxylase N-terminal domain-like
1iow-1 [seq. related domains] Alpha and beta (a/b) Biotin carboxylase N-terminal domain-like
1bncb-1 [seq. related domains] Alpha and beta (a/b) Biotin carboxylase N-terminal domain-like
1a2ob-1 [seq. related domains] Alpha and beta (a/b) CheB methylesterase domain (C-terminal residues 152-349)
1gpmd-4 [seq. related domains] Alpha and beta (a/b) Class I glutamine amidotransferases
1a0gb-2 [seq. related domains] Alpha and beta (a+b) D-amino acid aminotransferase Domain II
1vdrb-1 [seq. related domains] Alpha and beta (a/b) Dihydrofolate reductases
1daj-1 [seq. related domains] Alpha and beta (a/b) Dihydrofolate reductases
1fcdb-1 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
2tmdb-3 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
1gal-1 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
1vdc-1 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
1joa-2 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
3grt-2 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
1joa-1 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
1fcdb-2 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
3grt-1 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
1vdc-2 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
3cox-1 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
1quf-2 [seq. related domains] Alpha and beta (a/b) Ferredoxin reductase-like, C-terminal NADP-linked domain
1fdr-2 [seq. related domains] Alpha and beta (a/b) Ferredoxin reductase-like, C-terminal NADP-linked domain
1ndh-2 [seq. related domains] Alpha and beta (a/b) Ferredoxin reductase-like, C-terminal NADP-linked domain
2pia-2 [seq. related domains] Alpha and beta (a/b) Ferredoxin reductase-like, C-terminal NADP-linked domain
1dxy-1 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
2nadb-1 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
1scue-3 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
1ag9b-1 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
1psdb-1 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
1reqc-3 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
1ese-1 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
4cat-2 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
1oxmb-1 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
1ordb-1 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
2reqd-3 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
1scud-2 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
1fsp-1 [seq. related domains] Alpha and beta (a/b) Flavodoxin-like
1hotb-1 [seq. related domains] Alpha and beta (a/b) Glucosamine 6-phosphate deaminase
4ecad-1 [seq. related domains] Alpha and beta (a/b) Glutaminase/Asparaginase Domain I
4ecad-2 [seq. related domains] Alpha and beta (a/b) Glutaminase/Asparaginase Domain II
1garb-1 [seq. related domains] Alpha and beta (a/b) Glycinamide ribonucleotide transformylase Domain I
1atzb-1 [seq. related domains] Alpha and beta (a/b) Integrin A (or I) domain
1paub-1 [seq. related domains] Alpha and beta (a/b) Interleukin-1beta converting enzyme (a cysteine protease)
1lam-1 [seq. related domains] Alpha and beta (a/b) Leucine aminopeptidase, N-terminal domain
1nbac-1 [seq. related domains] Alpha and beta (a/b) N-carbamoylsarcosine amidohydrolase
2dpg-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1fdw-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1dira-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1bdmb-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1dxy-2 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1ldg-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1drw-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1a7kd-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1ykfd-2 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
2pgd-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1dapb-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1zid-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1scud-1 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1miod-3 [seq. related domains] Alpha and beta (a/b) Nitrogenase iron-molybdenum protein, alpha and beta chains domain III
1mioc-3 [seq. related domains] Alpha and beta (a/b) Nitrogenase iron-molybdenum protein, alpha and beta chains domain III
1mioc-1 [seq. related domains] Alpha and beta (a/b) Nitrogenase iron-molybdenum protein, alpha chain domain I
1miod-2 [seq. related domains] Alpha and beta (a/b) Nitrogenase iron-molybdenum protein, beta and alpha chains domain II
1miod-1 [seq. related domains] Alpha and beta (a/b) Nitrogenase iron-molybdenum protein, beta chain domain I
1n2ch-1 [seq. related domains] Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
1gky-1 [seq. related domains] Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
1elo-1 [seq. related domains] Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
1aipf-2 [seq. related domains] Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
1ankb-1 [seq. related domains] Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
1fts-2 [seq. related domains] Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
1tmkb-1 [seq. related domains] Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
1dai-1 [seq. related domains] Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
1gp2a-2 [seq. related domains] Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
1guab-1 [seq. related domains] Alpha and beta (a/b) P-loop containing nucleotide triphosphate hydrolases
2recf-1 [seq. related domains] Alpha and beta (a+b) P-loop containing nucleotide triphosphate hydrolases, small a+b insert
1ajsb-2 [seq. related domains] Alpha and beta (a/b) PLP-dependent transferases Domain II
1ordb-2 [seq. related domains] Alpha and beta (a/b) PLP-dependent transferases Domain II
2canc-2 [seq. related domains] Alpha and beta (a/b) PLP-dependent transferases Domain II
2tplb-3 [seq. related domains] Alpha and beta (a/b) PLP-dependent transferases Domain III
1dbqb-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain I
1pea-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain I
1ba2b-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain I
2liv-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain I
1lbgd-6 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain I
1bap-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain I
1dbqb-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain II
1ba2b-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain II
2liv-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain II
1bap-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain II
1pea-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain II
1ah5-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain I
1rkm-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain I
1wdna-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain I
1sbp-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain I
1blf-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain I
1a7lc-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain I
1amf-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain I
1oibb-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain I
1poy4-1 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain I
1blf-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1sbp-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1wdna-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1oibb-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1poy4-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1al3-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1a7lc-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1ah5-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1mrp-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
1amf-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like II Domain II
2pfkd-1 [seq. related domains] Alpha and beta (a/b) Phosphofructokinase Domain I
2pfkd-2 [seq. related domains] Alpha and beta (a/b) Phosphofructokinase Domain II
1lxtb-1 [seq. related domains] Alpha and beta (a/b) Phosphoglucomutase, first 3 domains
1lxtb-3 [seq. related domains] Alpha and beta (a/b) Phosphoglucomutase, first 3 domains
1lxtb-2 [seq. related domains] Alpha and beta (a/b) Phosphoglucomutase, first 3 domains
2pgk-1 [seq. related domains] Alpha and beta (a/b) Phosphoglycerate kinase Domain I
13pkd-1 [seq. related domains] Alpha and beta (a/b) Phosphoglycerate kinase Domain I
2pgk-2 [seq. related domains] Alpha and beta (a/b) Phosphoglycerate kinase Domain II
13pkd-2 [seq. related domains] Alpha and beta (a/b) Phosphoglycerate kinase Domain II
1ecjd-2 [seq. related domains] Alpha and beta (a/b) Phosphoribosyltransferases (PRTases)
1orob-1 [seq. related domains] Alpha and beta (a/b) Phosphoribosyltransferases (PRTases)
1dbrd-1 [seq. related domains] Alpha and beta (a/b) Phosphoribosyltransferases (PRTases)
1pnt-1 [seq. related domains] Alpha and beta (a/b) Phosphotyrosine protein phosphatases I
1a3wb-1 [seq. related domains] Alpha and beta (a/b) Pyruvate kinase, C-terminal domain
1pyk-3 [seq. related domains] Alpha and beta (a/b) Pyruvate kinase, C-terminal domain
1powb-2 [seq. related domains] Alpha and beta (a/b) Pyruvate oxidase and decarboxylase, middle domain
1ypdb-2 [seq. related domains] Alpha and beta (a/b) Pyruvate oxidase and decarboxylase, middle domain
1bhmb-1 [seq. related domains] Alpha and beta (a/b) Restriction endonucleases
1rhs-1 [seq. related domains] Alpha and beta (a/b) Rhodanese
1rhs-2 [seq. related domains] Alpha and beta (a/b) Rhodanese
5mhta-1 [seq. related domains] Alpha and beta (a/b) S-adenosyl-L-methionine-dependent methyltransferases Domain I
1suaa-1 [seq. related domains] Alpha and beta (a/b) Subtilases
1awbb-2 [seq. related domains] Alpha and beta (a/b) Sugar phosphatases alpha/beta C terminal domain
1inp-2 [seq. related domains] Alpha and beta (a/b) Sugar phosphatases alpha/beta C terminal domain
1fsab-2 [seq. related domains] Alpha and beta (a/b) Sugar phosphatases alpha/beta C terminal domain
1powb-1 [seq. related domains] Alpha and beta (a/b) Thiamin-binding
1ypdb-3 [seq. related domains] Alpha and beta (a/b) Thiamin-binding
1ypdb-1 [seq. related domains] Alpha and beta (a/b) Thiamin-binding
1ay0b-2 [seq. related domains] Alpha and beta (a/b) Thiamin-binding
1powb-3 [seq. related domains] Alpha and beta (a/b) Thiamin-binding
1pxtb-2 [seq. related domains] Alpha and beta (a/b) Thiolase Domain II
1tpt-2 [seq. related domains] Alpha and beta (a/b) Thymidine phosphorylase Domain II - Rossmann-fold like
1ay0b-3 [seq. related domains] Alpha and beta (a/b) Transketolase, C-terminal domain
2tmdb-2 [seq. related domains] Alpha and beta (a/b) Trimethylamine dehydrogenase, middle domain
2tsyb-1 [seq. related domains] Alpha and beta (a/b) Tryptophan synthase, beta-subunit Domain I
2tsyb-2 [seq. related domains] Alpha and beta (a/b) Tryptophan synthase, beta-subunit Domain II
1ecl-1 [seq. related domains] Alpha and beta (a/b) Type I DNA topoisomerase Rossmann-fold like domain
1akz-1 [seq. related domains] Alpha and beta (a/b) Uracil-DNA glycosylase
1bcsb-1 [seq. related domains] Alpha and beta (a/b) alpha/beta-Hydrolases
1oilb-1 [seq. related domains] Alpha and beta (a/b) alpha/beta-Hydrolases
1hdeb-1 [seq. related domains] Alpha and beta (a/b) alpha/beta-Hydrolases
1thtb-1 [seq. related domains] Alpha and beta (a/b) alpha/beta-Hydrolases
1yasa-1 [seq. related domains] Alpha and beta (a/b) alpha/beta-Hydrolases
1lgyc-1 [seq. related domains] Alpha and beta (a/b) alpha/beta-Hydrolases
1rp1-1 [seq. related domains] Alpha and beta (a/b) alpha/beta-Hydrolases
1lbt-1 [seq. related domains] Alpha and beta (a/b) alpha/beta-Hydrolases
2bgu-1 [seq. related domains] Alpha and beta (a/b) beta-Glucosyltransferase & glycogen phosphorylase Domain I
2bgu-2 [seq. related domains] Alpha and beta (a/b) beta-Glucosyltransferase & glycogen phosphorylase Domain II
1iux-1 [seq. related domains] Multi-domain (alpha and beta) p-Hydroxybenzoate hydroxylase as a single domain
1uag-3 [seq. related domains] undefined undefined
1lehb-3 [seq. related domains] undefined undefined
1ble-1 [seq. related domains] undefined undefined
1fohd-1 [seq. related domains] undefined undefined
1muga-1 [seq. related domains] undefined undefined
1e2b-1 [seq. related domains] undefined undefined
1yub-1 [seq. related domains] undefined undefined
2frvl-1 [seq. related domains] undefined undefined
1lehb-1 [seq. related domains] undefined undefined
1nsyb-1 [seq. related domains] undefined undefined
1auxb-1 [seq. related domains] undefined undefined
1udc-1 [seq. related domains] undefined undefined
2masd-1 [seq. related domains] undefined undefined
1lbeb-2 [seq. related domains] undefined undefined
1av6a-1 [seq. related domains] undefined undefined
1efvb-1 [seq. related domains] undefined undefined
1aup-2 [seq. related domains] undefined undefined
4dmr-2 [seq. related domains] undefined undefined
1aup-3 [seq. related domains] undefined undefined
1gnd-1 [seq. related domains] undefined undefined
1uag-1 [seq. related domains] undefined undefined
1xvab-1 [seq. related domains] undefined undefined
1pdo-1 [seq. related domains] undefined undefined
1bgw-1 [seq. related domains] undefined undefined
1jdbk-4 [seq. related domains] undefined undefined
1fuif-2 [seq. related domains] undefined undefined
2admb-1 [seq. related domains] undefined undefined
1efvb-3 [seq. related domains] undefined undefined
1lci-1 [seq. related domains] undefined undefined
1wab-1 [seq. related domains] undefined undefined
1rkd-1 [seq. related domains] undefined undefined
1kmnd-2 [seq. related domains] undefined undefined
1al3-1 [seq. related domains] undefined undefined
1din-1 [seq. related domains] undefined undefined
1iphd-3 [seq. related domains] undefined undefined
1jud-1 [seq. related domains] undefined undefined
1vid-1 [seq. related domains] undefined undefined
1bif-1 [seq. related domains] undefined undefined
3rlac-1 [seq. related domains] undefined undefined
1ad2-2 [seq. related domains] undefined undefined
1vhrb-2 [seq. related domains] undefined undefined
1lbu-1 [seq. related domains] undefined undefined
1lci-2 [seq. related domains] undefined undefined
1yvel-1 [seq. related domains] undefined undefined
1ak1-2 [seq. related domains] undefined undefined
1fuif-1 [seq. related domains] undefined undefined
1cfr-1 [seq. related domains] undefined undefined
1a5t-1 [seq. related domains] undefined undefined
1delb-1 [seq. related domains] undefined undefined
1fsz-1 [seq. related domains] undefined undefined
1skyb-2 [seq. related domains] undefined undefined
1uag-2 [seq. related domains] undefined undefined
1ad3b-4 [seq. related domains] undefined undefined
1jdbk-6 [seq. related domains] undefined undefined
1fmtb-1 [seq. related domains] undefined undefined
1rvvz-1 [seq. related domains] undefined undefined
1af7-2 [seq. related domains] undefined undefined
1ofgf-1 [seq. related domains] undefined undefined
1efvb-2 [seq. related domains] undefined undefined
1ddoh-1 [seq. related domains] undefined undefined
1a98b-1 [seq. related domains] undefined undefined
1buz-1 [seq. related domains] undefined undefined
1aurb-1 [seq. related domains] undefined undefined
1fjmb-2 [seq. related domains] undefined undefined
2fokb-4 [seq. related domains] undefined undefined
1atib-2 [seq. related domains] undefined undefined
1ak1-1 [seq. related domains] undefined undefined

Cluster 4

Descend tree into cluster 4

1svr-1 [seq. related domains] Alpha and beta (a+b) Gelsolin-like (actin-severing protein)
1dik-3 [seq. related domains] Alpha and beta (a/b) The "swivelling" beta/beta/alpha domain
1atq-4 [seq. related domains] Alpha and beta (a/b) The "swivelling" beta/beta/alpha domain
1obwc-1 [seq. related domains] undefined undefined
1asx-1 [seq. related domains] undefined undefined
2vil-1 [seq. related domains] undefined undefined
1aua-2 [seq. related domains] undefined undefined
1jdbl-1 [seq. related domains] undefined undefined
1jfrb-2 [seq. related domains] undefined undefined
1cfyb-1 [seq. related domains] undefined undefined
1ezd-1 [seq. related domains] undefined undefined

Cluster 5

Descend tree into cluster 5

1atq-1 [seq. related domains] Alpha and beta (a/b) Aconitase, Domain I
1atq-3 [seq. related domains] Alpha and beta (a/b) Aconitase, Domain III
1taua-1 [seq. related domains] undefined undefined
1taq-1 [seq. related domains] undefined undefined
1qnf-1 [seq. related domains] undefined undefined
1exnb-1 [seq. related domains] undefined undefined
1tfr-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.


3dee@compbio.dundee.ac.uk