3 Dee - Database of Protein Domain Definitions
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The current cluster is formed at a score of 4.507
Ascend tree (bring in more domains)
Classes
% of representative set
Alpha and beta (a/b)
100.00
Breakdown into folds
% of cluster
% of class
Alpha and beta (a/b)
Ferredoxin reductase-like, C-terminal NADP-linked domain
from SCOP
66.67
1.46
NAD(P)-binding Rossmann-fold domains
from SCOP
16.67
0.36
Nitrogenase iron-molybdenum protein, beta chain domain I from 3Dee
16.67
0.36
It is formed by merging the following clusters
Cluster 1
Descend tree into cluster 1
1ykfd-2
[
seq. related domains
]
Alpha and beta (a/b)
NAD(P)-binding Rossmann-fold domains
1miod-1
[
seq. related domains
]
Alpha and beta (a/b)
Nitrogenase iron-molybdenum protein, beta chain domain I
Cluster 2
Descend tree into cluster 2
1ndh-2
[
seq. related domains
]
Alpha and beta (a/b)
Ferredoxin reductase-like, C-terminal NADP-linked domain
2pia-2
[
seq. related domains
]
Alpha and beta (a/b)
Ferredoxin reductase-like, C-terminal NADP-linked domain
1quf-2
[
seq. related domains
]
Alpha and beta (a/b)
Ferredoxin reductase-like, C-terminal NADP-linked domain
1fdr-2
[
seq. related domains
]
Alpha and beta (a/b)
Ferredoxin reductase-like, C-terminal NADP-linked domain
View superpositions of "checked" domains
Enter PDB code - optionally suffixing the code with the chain id.
3dee@compbio.dundee.ac.uk