3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 4.180

Ascend tree (bring in more domains)

Classes% of representative set
undefined 14.29
Alpha and beta (a/b) 85.71
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 14.29 0.16
Alpha and beta (a/b)
Ferredoxin reductase-like, C-terminal NADP-linked domain from SCOP 57.14 1.46
NAD(P)-binding Rossmann-fold domains from SCOP 14.29 0.36
Nitrogenase iron-molybdenum protein, beta chain domain I from 3Dee 14.29 0.36

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1jdbk-4 [seq. related domains] undefined undefined

Cluster 1

Descend tree into cluster 1

1ndh-2 [seq. related domains] Alpha and beta (a/b) Ferredoxin reductase-like, C-terminal NADP-linked domain
2pia-2 [seq. related domains] Alpha and beta (a/b) Ferredoxin reductase-like, C-terminal NADP-linked domain
1quf-2 [seq. related domains] Alpha and beta (a/b) Ferredoxin reductase-like, C-terminal NADP-linked domain
1fdr-2 [seq. related domains] Alpha and beta (a/b) Ferredoxin reductase-like, C-terminal NADP-linked domain
1ykfd-2 [seq. related domains] Alpha and beta (a/b) NAD(P)-binding Rossmann-fold domains
1miod-1 [seq. related domains] Alpha and beta (a/b) Nitrogenase iron-molybdenum protein, beta chain domain I

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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