3 Dee - Database of Protein Domain Definitions

[Search] [HELP]

The current cluster is formed at a score of 4.698

Ascend tree (bring in more domains)

Classes% of representative set
undefined 16.67
Alpha and beta (a/b) 83.33
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 16.67 0.16
Alpha and beta (a/b)
Periplasmic binding protein-like I Domain II from 3Dee 83.33 1.82

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1lci-2 [seq. related domains] undefined undefined

Cluster 1

Descend tree into cluster 1

1bap-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain II
1dbqb-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain II
1pea-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain II
1ba2b-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain II
2liv-2 [seq. related domains] Alpha and beta (a/b) Periplasmic binding protein-like I Domain II

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

3dee@compbio.dundee.ac.uk