3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 4.168

Ascend tree (bring in more domains)

Classes	% of representative set
undefined	7.14
Alpha and beta (a/b)	92.86

Breakdown into folds	% of cluster	% of class
undefined
undefined from 3Dee	7.14	0.16
Alpha and beta (a/b)
Flavodoxin-like from SCOP	35.71	1.82
Integrin A (or I) domain from SCOP	7.14	0.36
Periplasmic binding protein-like I Domain I from 3Dee	42.86	2.19
Phosphofructokinase Domain I from 3Dee	7.14	0.36

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

[seq. related domains]

Alpha and beta (a/b)

Phosphofructokinase Domain I

Cluster 1

Descend tree into cluster 1

1ag9b-1	[seq. related domains]	Alpha and beta (a/b)	Flavodoxin-like
1oxmb-1	[seq. related domains]	Alpha and beta (a/b)	Flavodoxin-like
1atzb-1	[seq. related domains]	Alpha and beta (a/b)	Integrin A (or I) domain
1fuif-1	[seq. related domains]	undefined	undefined

Cluster 2

Descend tree into cluster 2

2nadb-1	[seq. related domains]	Alpha and beta (a/b)	Flavodoxin-like
1dxy-1	[seq. related domains]	Alpha and beta (a/b)	Flavodoxin-like
1psdb-1	[seq. related domains]	Alpha and beta (a/b)	Flavodoxin-like
1dbqb-1	[seq. related domains]	Alpha and beta (a/b)	Periplasmic binding protein-like I Domain I
1pea-1	[seq. related domains]	Alpha and beta (a/b)	Periplasmic binding protein-like I Domain I
1ba2b-1	[seq. related domains]	Alpha and beta (a/b)	Periplasmic binding protein-like I Domain I
1bap-1	[seq. related domains]	Alpha and beta (a/b)	Periplasmic binding protein-like I Domain I
2liv-1	[seq. related domains]	Alpha and beta (a/b)	Periplasmic binding protein-like I Domain I
1lbgd-6	[seq. related domains]	Alpha and beta (a/b)	Periplasmic binding protein-like I Domain I

View superpositions of "checked" domains

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