3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 1.297

Ascend tree (bring in more domains)

Classes% of representative set
undefined 54.55
Alpha and beta (a/b) 45.45
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 54.55 0.94
Alpha and beta (a/b)
Glucosamine 6-phosphate deaminase from SCOP 9.09 0.36
PLP-dependent transferases Domain II from 3Dee 27.27 1.09
S-adenosyl-L-methionine-dependent methyltransferases Domain I from 3Dee 9.09 0.36

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1hotb-1 [seq. related domains] Alpha and beta (a/b) Glucosamine 6-phosphate deaminase
1ordb-2 [seq. related domains] Alpha and beta (a/b) PLP-dependent transferases Domain II
2canc-2 [seq. related domains] Alpha and beta (a/b) PLP-dependent transferases Domain II
1ajsb-2 [seq. related domains] Alpha and beta (a/b) PLP-dependent transferases Domain II

Cluster 2

Descend tree into cluster 2

5mhta-1 [seq. related domains] Alpha and beta (a/b) S-adenosyl-L-methionine-dependent methyltransferases Domain I
1av6a-1 [seq. related domains] undefined undefined
1yub-1 [seq. related domains] undefined undefined
2admb-1 [seq. related domains] undefined undefined
1xvab-1 [seq. related domains] undefined undefined
1af7-2 [seq. related domains] undefined undefined
1vid-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

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