3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 5.207

Ascend tree (bring in more domains)

Classes% of representative set
Alpha and beta (a/b) 100.00
Breakdown into folds% of cluster % of class
Alpha and beta (a/b)
FAD (also NAD)-binding motif from 3Dee 80.00 1.46
Trimethylamine dehydrogenase, middle domain from 3Dee 20.00 0.36

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

2tmdb-2 [seq. related domains] Alpha and beta (a/b) Trimethylamine dehydrogenase, middle domain

Cluster 1

Descend tree into cluster 1

1joa-1 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
3grt-1 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
1vdc-1 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif
1fcdb-1 [seq. related domains] Alpha and beta (a/b) FAD (also NAD)-binding motif

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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