3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 0.366

Ascend tree (bring in more domains)

Classes% of representative set
undefined 22.22
Alpha and beta (a+b) 66.67
All beta 11.11
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 22.22 0.31
Alpha and beta (a+b)
DNA clamp from SCOP 55.56 2.59
Fe,Mn superoxide dismutase (SOD), C-terminal domain from SCOP 11.11 0.52
All beta
OB-fold from SCOP 11.11 0.45

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1axce-2 [seq. related domains] Alpha and beta (a+b) DNA clamp
2polb-1 [seq. related domains] Alpha and beta (a+b) DNA clamp
2polb-3 [seq. related domains] Alpha and beta (a+b) DNA clamp
1axce-1 [seq. related domains] Alpha and beta (a+b) DNA clamp
2polb-2 [seq. related domains] Alpha and beta (a+b) DNA clamp
3nuc-1 [seq. related domains] All beta OB-fold
1ecra-2 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1ar5b-2 [seq. related domains] Alpha and beta (a+b) Fe,Mn superoxide dismutase (SOD), C-terminal domain
1ois-2 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

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