3 Dee - Database of Protein Domain Definitions

[Search] [HELP]

The current cluster is formed at a score of 0.978

Ascend tree (bring in more domains)

Classes% of representative set
undefined 33.33
Small proteins 33.33
All beta 33.33
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 33.33 0.16
Small proteins
beta-Galactosidase, N terminal fragment from 3Dee 33.33 0.87
All beta
Viral coat and capsid proteins from SCOP 33.33 0.45

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1bgmp-1 [seq. related domains] Small proteins beta-Galactosidase, N terminal fragment

Cluster 1

Descend tree into cluster 1

1rvf4-1 [seq. related domains] All beta Viral coat and capsid proteins
1reqc-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

3dee@compbio.dundee.ac.uk