3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 4.333

Ascend tree (bring in more domains)

Classes% of representative set
undefined 22.22
All alpha 77.78
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 22.22 0.31
All alpha
Helix-loop-helix DNA-binding domain from SCOP 11.11 0.49
Oligomers of long helices from 3Dee 66.67 2.96

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1mdyb-1 [seq. related domains] All alpha Helix-loop-helix DNA-binding domain

Cluster 1

Descend tree into cluster 1

1a02f-1 [seq. related domains] All alpha Oligomers of long helices
4ifm-1 [seq. related domains] All alpha Oligomers of long helices
2ifo-1 [seq. related domains] All alpha Oligomers of long helices
2dgca-1 [seq. related domains] All alpha Oligomers of long helices
1scma-1 [seq. related domains] All alpha Oligomers of long helices
1a02j-1 [seq. related domains] All alpha Oligomers of long helices
1av1d-1 [seq. related domains] undefined undefined
1mof-1 [seq. related domains] undefined undefined

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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