3 Dee - Database of Protein Domain Definitions
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The current cluster is formed at a score of 3.345
Ascend tree (bring in more domains)
Classes
% of representative set
undefined
20.00
Peptides
10.00
All alpha
70.00
Breakdown into folds
% of cluster
% of class
undefined
undefined from 3Dee
20.00
0.31
Peptides
Transmembrane helical fragments from 3Dee
10.00
2.04
All alpha
Helix-loop-helix DNA-binding domain
from SCOP
10.00
0.49
Oligomers of long helices from 3Dee
60.00
2.96
It is formed by merging the following clusters
Cluster 0
All domains in cluster 0 sub-divide into single membered clusters
1bct-1
[
seq. related domains
]
Peptides
Transmembrane helical fragments
Cluster 1
Descend tree into cluster 1
1mdyb-1
[
seq. related domains
]
All alpha
Helix-loop-helix DNA-binding domain
1a02f-1
[
seq. related domains
]
All alpha
Oligomers of long helices
4ifm-1
[
seq. related domains
]
All alpha
Oligomers of long helices
2ifo-1
[
seq. related domains
]
All alpha
Oligomers of long helices
2dgca-1
[
seq. related domains
]
All alpha
Oligomers of long helices
1scma-1
[
seq. related domains
]
All alpha
Oligomers of long helices
1a02j-1
[
seq. related domains
]
All alpha
Oligomers of long helices
1av1d-1
[
seq. related domains
]
undefined
undefined
1mof-1
[
seq. related domains
]
undefined
undefined
View superpositions of "checked" domains
Enter PDB code - optionally suffixing the code with the chain id.
3dee@compbio.dundee.ac.uk